RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SREBF2Q12772 1141 aa22.34■■□□□ 1.17
UBE2D4-209ENST00000454428 HABP4Q5JVS0 413 aaKnown RBP22.34■■□□□ 1.17
UBE2D4-209ENST00000454428 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
UBE2D4-209ENST00000454428 RBBP6Q7Z6E9 1792 aaKnown RBP22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 SASH1O94885 1247 aa22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 LDLRAD1Q5T700 205 aa22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 CCDC191Q8NCU4 936 aa22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
UBE2D4-209ENST00000454428 SZT2Q5T011 3432 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 PRKG1Q13976 671 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 SPRYD7Q5W111 196 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 FZD1Q9UP38 647 aa22.32■■□□□ 1.16
UBE2D4-209ENST00000454428 TXNRD3Q86VQ6 643 aa22.31■■□□□ 1.16
UBE2D4-209ENST00000454428 ZBED3Q96IU2 234 aaPredicted RBP22.31■■□□□ 1.16
UBE2D4-209ENST00000454428 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
UBE2D4-209ENST00000454428 NF2P35240 595 aa22.3■■□□□ 1.16
UBE2D4-209ENST00000454428 STRIP1Q5VSL9 837 aa22.3■■□□□ 1.16
UBE2D4-209ENST00000454428 CWC25Q9NXE8 425 aaPredicted RBP22.3■■□□□ 1.16
UBE2D4-209ENST00000454428 MYH3P11055 1940 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 KIAA0100Q14667 2235 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 OTOP1Q7RTM1 612 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 ARMC9Q7Z3E5 817 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 OGFOD1Q8N543 542 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 MYO3BQ8WXR4 1341 aa22.29■■□□□ 1.16
UBE2D4-209ENST00000454428 ZNF853P0CG23 659 aa22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 CCT4P50991 539 aaKnown RBP22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 CTSWP56202 376 aa22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 RUNDC1Q96C34 613 aa22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 BSDC1Q9NW68 430 aaPredicted RBP22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 TRIM17Q9Y577 477 aa22.28■■□□□ 1.16
UBE2D4-209ENST00000454428 IFNL1Q8IU54 200 aa22.27■■□□□ 1.16
UBE2D4-209ENST00000454428 TTLL11Q8NHH1 800 aa22.27■■□□□ 1.16
UBE2D4-209ENST00000454428 FBXW7Q969H0 707 aa22.27■■□□□ 1.16
UBE2D4-209ENST00000454428 GREM2Q9H772 168 aa22.27■■□□□ 1.16
UBE2D4-209ENST00000454428 ANGEL1Q9UNK9 670 aaKnown RBP22.27■■□□□ 1.16
UBE2D4-209ENST00000454428 IGF2BP3O00425 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 ALDH1A1P00352 501 aa22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 KLRK1P26718 216 aa22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 APOBEC3FQ8IUX4 373 aaKnown RBP22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 CDC5LQ99459 802 aaKnown RBP22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 COA1Q9GZY4 146 aa22.26■■□□□ 1.15
UBE2D4-209ENST00000454428 CAP1Q01518 475 aa22.25■■□□□ 1.15
UBE2D4-209ENST00000454428 RALBP1Q15311 655 aa22.25■■□□□ 1.15
UBE2D4-209ENST00000454428 MAP3K11Q16584 847 aa22.25■■□□□ 1.15
UBE2D4-209ENST00000454428 KIAA0825Q8IV33 1275 aa22.25■■□□□ 1.15
UBE2D4-209ENST00000454428 CLMNQ96JQ2 1002 aa22.25■■□□□ 1.15
UBE2D4-209ENST00000454428 COL1A1P02452 1464 aaPredicted RBP22.24■■□□□ 1.15
UBE2D4-209ENST00000454428 MANSC4A6NHS7 340 aaPredicted RBP22.24■■□□□ 1.15
UBE2D4-209ENST00000454428 ELL2O00472 640 aaPredicted RBP22.24■■□□□ 1.15
UBE2D4-209ENST00000454428 IGKV5-2P06315 115 aa22.24■■□□□ 1.15
UBE2D4-209ENST00000454428 INTS3Q68E01 1043 aaKnown RBP22.24■■□□□ 1.15
UBE2D4-209ENST00000454428 ECM29Q5VYK3 1845 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 MMP14P50281 582 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 TTLL5Q6EMB2 1281 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 WNK4Q96J92 1243 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 DEFB129Q9H1M3 183 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 PTPN22Q9Y2R2 807 aa22.23■■□□□ 1.15
UBE2D4-209ENST00000454428 INHBEP58166 350 aa22.22■■□□□ 1.15
UBE2D4-209ENST00000454428 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
UBE2D4-209ENST00000454428 PCDHAC2Q9Y5I4 1007 aa22.22■■□□□ 1.15
UBE2D4-209ENST00000454428 ZBTB48P10074 688 aaPredicted RBP22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 EN2P19622 333 aaPredicted RBP22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 ARMC5Q96C12 935 aa22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 SLC10A4Q96EP9 437 aa22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 LEMD3Q9Y2U8 911 aa22.21■■□□□ 1.15
UBE2D4-209ENST00000454428 GJA5P36382 358 aa22.2■■□□□ 1.14
UBE2D4-209ENST00000454428 GTF2IP78347 998 aa22.2■■□□□ 1.14
UBE2D4-209ENST00000454428 CERS5Q8N5B7 392 aa22.2■■□□□ 1.14
UBE2D4-209ENST00000454428 CD99L2Q8TCZ2 262 aa22.2■■□□□ 1.14
UBE2D4-209ENST00000454428 RANBP2P49792 3224 aaKnown RBP22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 CRHR2Q13324 411 aa22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 ZNF804BA4D1E1 1349 aa22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 IRS2Q9Y4H2 1338 aa22.19■■□□□ 1.14
UBE2D4-209ENST00000454428 AOX1Q06278 1338 aa22.18■■□□□ 1.14
UBE2D4-209ENST00000454428 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
UBE2D4-209ENST00000454428 MTMR14Q8NCE2 650 aa22.18■■□□□ 1.14
UBE2D4-209ENST00000454428 PTPN18Q99952 460 aa22.18■■□□□ 1.14
UBE2D4-209ENST00000454428 OTOFQ9HC10 1997 aa22.18■■□□□ 1.14
UBE2D4-209ENST00000454428 PI4KAP2A4QPH2 592 aa22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 DDX58O95786 925 aaKnown RBP22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 CWF19L2Q2TBE0 894 aaKnown RBP22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 KSR2Q6VAB6 950 aa22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 PI4KAP1Q8N8J0 262 aa22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 ERO1AQ96HE7 468 aa22.17■■□□□ 1.14
UBE2D4-209ENST00000454428 A0A1B0GUL6 1792 aa22.16■■□□□ 1.14
UBE2D4-209ENST00000454428 CEP290O15078 2479 aa22.16■■□□□ 1.14
UBE2D4-209ENST00000454428 NEURL1BA8MQ27 555 aa22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 DLGAP5Q15398 846 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms