RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 COL1A1P02452 1464 aaPredicted RBP18.41■□□□□ 0.54
LYSMD3-202ENST00000453259 COA1Q9GZY4 146 aa18.41■□□□□ 0.54
LYSMD3-202ENST00000453259 HPS5Q9UPZ3 1129 aa18.41■□□□□ 0.54
LYSMD3-202ENST00000453259 NEXNQ0ZGT2 675 aa18.4■□□□□ 0.54
LYSMD3-202ENST00000453259 DACT2Q5SW24 774 aa18.4■□□□□ 0.54
LYSMD3-202ENST00000453259 APOBEC3FQ8IUX4 373 aaKnown RBP18.4■□□□□ 0.54
LYSMD3-202ENST00000453259 LEMD3Q9Y2U8 911 aa18.4■□□□□ 0.54
LYSMD3-202ENST00000453259 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
LYSMD3-202ENST00000453259 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
LYSMD3-202ENST00000453259 MINPP1Q9UNW1 487 aa18.39■□□□□ 0.53
LYSMD3-202ENST00000453259 MYH3P11055 1940 aa18.39■□□□□ 0.53
LYSMD3-202ENST00000453259 WNT10BO00744 389 aa18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 ZNF296Q8WUU4 475 aaPredicted RBP18.38■□□□□ 0.53
LYSMD3-202ENST00000453259 UNCXA6NJT0 531 aa18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 INHBEP58166 350 aa18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 TTLL12Q14166 644 aaPredicted RBP18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 NBPF9Q3BBW0 867 aa18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 ANKRD2Q9GZV1 360 aa18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
LYSMD3-202ENST00000453259 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
LYSMD3-202ENST00000453259 GPR25O00155 361 aa18.36■□□□□ 0.53
LYSMD3-202ENST00000453259 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
LYSMD3-202ENST00000453259 IGHMBP2P38935 993 aaKnown RBP18.35■□□□□ 0.53
LYSMD3-202ENST00000453259 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
LYSMD3-202ENST00000453259 GREM2Q9H772 168 aa18.35■□□□□ 0.53
LYSMD3-202ENST00000453259 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 APAF1O14727 1248 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 FKTNO75072 461 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 TBC1D8O95759 1140 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 MOB2Q70IA6 237 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 PLA2G12BQ9BX93 195 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 PPP2R3BQ9Y5P8 575 aa18.34■□□□□ 0.53
LYSMD3-202ENST00000453259 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
LYSMD3-202ENST00000453259 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
LYSMD3-202ENST00000453259 TTLL5Q6EMB2 1281 aa18.33■□□□□ 0.52
LYSMD3-202ENST00000453259 GCC1Q96CN9 775 aa18.33■□□□□ 0.52
LYSMD3-202ENST00000453259 MANSC4A6NHS7 340 aaPredicted RBP18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 ZBTB48P10074 688 aaPredicted RBP18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 MAP3K11Q16584 847 aa18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 ZBED3Q96IU2 234 aaPredicted RBP18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 LAMB1P07942 1786 aa18.32■□□□□ 0.52
LYSMD3-202ENST00000453259 H7C1W4 665 aa18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 SPRYD7Q5W111 196 aa18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
LYSMD3-202ENST00000453259 SASH1O94885 1247 aa18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
LYSMD3-202ENST00000453259 PPP1R12BO60237 982 aaPredicted RBP18.29■□□□□ 0.52
LYSMD3-202ENST00000453259 ITGA6P23229 1130 aa18.29■□□□□ 0.52
LYSMD3-202ENST00000453259 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
LYSMD3-202ENST00000453259 WTIPA6NIX2 430 aaPredicted RBP18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 MYO1BO43795 1136 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 CSF1RP07333 972 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 KCNJ4P48050 445 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 GCKRQ14397 625 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 DLGAP5Q15398 846 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 TXNRD3Q86VQ6 643 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 KIAA0825Q8IV33 1275 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 DEFB129Q9H1M3 183 aa18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 SCAF8Q9UPN6 1271 aaKnown RBP18.28■□□□□ 0.52
LYSMD3-202ENST00000453259 GTF2IP78347 998 aa18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 SUPT20HL1Q3ZLR7 823 aa18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 OTUD7BQ6GQQ9 843 aa18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
LYSMD3-202ENST00000453259 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
LYSMD3-202ENST00000453259 IFNL1Q8IU54 200 aa18.26■□□□□ 0.51
LYSMD3-202ENST00000453259 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
LYSMD3-202ENST00000453259 LINS1Q8NG48 757 aa18.26■□□□□ 0.51
LYSMD3-202ENST00000453259 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
LYSMD3-202ENST00000453259 IL16Q14005 1332 aa18.25■□□□□ 0.51
LYSMD3-202ENST00000453259 CHRNDQ07001 517 aa18.25■□□□□ 0.51
LYSMD3-202ENST00000453259 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
LYSMD3-202ENST00000453259 ERO1AQ96HE7 468 aa18.25■□□□□ 0.51
LYSMD3-202ENST00000453259 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms