RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 FIBPO43427 364 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 IDH1O75874 414 aaKnown RBP14.01□□□□□ -0.17
VTA1-203ENST00000452973 PDE8BO95263 885 aa14.01□□□□□ -0.17
VTA1-203ENST00000452973 CAMTA2O94983 1202 aa14□□□□□ -0.17
VTA1-203ENST00000452973 TMEM63CQ9P1W3 806 aa14□□□□□ -0.17
VTA1-203ENST00000452973 PHKA1P46020 1223 aa14□□□□□ -0.17
VTA1-203ENST00000452973 BARGINQ6ZT62 677 aa14□□□□□ -0.17
VTA1-203ENST00000452973 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
VTA1-203ENST00000452973 F13A1P00488 732 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 RIC1Q4ADV7 1423 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 RFX7Q2KHR2 1363 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 NUP98P52948 1817 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 SYCE3A1L190 88 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 JCADQ9P266 1359 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 FOSBP53539 338 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
VTA1-203ENST00000452973 DNM1Q05193 864 aaKnown RBP13.98□□□□□ -0.17
VTA1-203ENST00000452973 CCDC102BQ68D86 513 aa13.98□□□□□ -0.17
VTA1-203ENST00000452973 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
VTA1-203ENST00000452973 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
VTA1-203ENST00000452973 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
VTA1-203ENST00000452973 JAK2O60674 1132 aa13.98□□□□□ -0.17
VTA1-203ENST00000452973 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
VTA1-203ENST00000452973 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
VTA1-203ENST00000452973 E7EWF7 191 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 APPP05067 770 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 GTF2E1P29083 439 aaPredicted RBP13.97□□□□□ -0.17
VTA1-203ENST00000452973 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 VGLL2Q8N8G2 317 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 TCHHQ07283 1943 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 CCT2P78371 535 aaKnown RBP13.97□□□□□ -0.17
VTA1-203ENST00000452973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.97□□□□□ -0.17
VTA1-203ENST00000452973 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
VTA1-203ENST00000452973 IQSEC3Q9UPP2 1182 aaPredicted RBP13.97□□□□□ -0.17
VTA1-203ENST00000452973 SLIT2O94813 1529 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 MBD3O95983 291 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
VTA1-203ENST00000452973 DHX32Q7L7V1 743 aaKnown RBP13.96□□□□□ -0.17
VTA1-203ENST00000452973 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
VTA1-203ENST00000452973 USP21Q9UK80 565 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 GPAA1O43292 621 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 FGAP02671 866 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 APPBP2Q92624 585 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.17
VTA1-203ENST00000452973 ATP6V1DQ9Y5K8 247 aa13.96□□□□□ -0.17
VTA1-203ENST00000452973 NRAPQ86VF7 1730 aa13.96□□□□□ -0.18
VTA1-203ENST00000452973 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.18
VTA1-203ENST00000452973 ZFYP08048 801 aaPredicted RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 LPIN2Q92539 896 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 ZNF652Q9Y2D9 606 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 NTSR2O95665 410 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 GPHNQ9NQX3 736 aaPredicted RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
VTA1-203ENST00000452973 WNK3Q9BYP7 1800 aa13.95□□□□□ -0.18
VTA1-203ENST00000452973 SLC5A1P13866 664 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 VPS72Q15906 364 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 IMMTQ16891 758 aaKnown RBP13.94□□□□□ -0.18
VTA1-203ENST00000452973 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 MROH5Q6ZUA9 1318 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 WTIPA6NIX2 430 aaPredicted RBP13.94□□□□□ -0.18
VTA1-203ENST00000452973 FOXP2O15409 715 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
VTA1-203ENST00000452973 BCAMP50895 628 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 SCRN1Q12765 414 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 RNF214Q8ND24 703 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 WWC3Q9ULE0 1092 aa13.94□□□□□ -0.18
VTA1-203ENST00000452973 ZNF445P59923 1031 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 MEX3CQ5U5Q3 659 aaKnown RBP13.93□□□□□ -0.18
VTA1-203ENST00000452973 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
VTA1-203ENST00000452973 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
VTA1-203ENST00000452973 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 PDCP20941 246 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 FAM184AQ8NB25 1140 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 ALDH8A1Q9H2A2 487 aaPredicted RBP13.93□□□□□ -0.18
VTA1-203ENST00000452973 MYH3P11055 1940 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 ADD2P35612 726 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 ANKRD36CQ5JPF3 1778 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 CTNNA3Q9UI47 895 aa13.93□□□□□ -0.18
VTA1-203ENST00000452973 H3BQV1 296 aa13.92□□□□□ -0.18
VTA1-203ENST00000452973 ZNF213O14771 459 aa13.92□□□□□ -0.18
VTA1-203ENST00000452973 GNPATO15228 680 aa13.92□□□□□ -0.18
VTA1-203ENST00000452973 TTF1Q15361 905 aaPredicted RBP13.92□□□□□ -0.18
VTA1-203ENST00000452973 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms