RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.15□□□□□ -1.26
LINC00393-202ENST00000452852 KIF4AO95239 1232 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 SPATA31C1P0DKV0 1188 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 TRIM28Q13263 835 aaKnown RBP7.14□□□□□ -1.27
LINC00393-202ENST00000452852 PRRT3Q5FWE3 981 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 MSL1Q68DK7 614 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 ILDR2Q71H61 639 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 BRPF3Q9ULD4 1205 aa7.14□□□□□ -1.27
LINC00393-202ENST00000452852 GNEQ9Y223 722 aaKnown RBP7.14□□□□□ -1.27
LINC00393-202ENST00000452852 A0A0A0MRY4 1105 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 CES1P23141 567 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 ATP11AP98196 1134 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 EHHADHQ08426 723 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 DOC2BQ14184 412 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 ARTNQ5T4W7 220 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 GDF6Q6KF10 455 aaPredicted RBP7.13□□□□□ -1.27
LINC00393-202ENST00000452852 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 CHRDQ9H2X0 955 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 TRIM33Q9UPN9 1127 aa7.13□□□□□ -1.27
LINC00393-202ENST00000452852 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 TNFRSF21O75509 655 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 NCAPG2Q86XI2 1143 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 WFDC8Q8IUA0 241 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 CEP120Q8N960 986 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 RASSF4Q9H2L5 321 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
LINC00393-202ENST00000452852 FOXD3Q9UJU5 478 aaPredicted RBP7.12□□□□□ -1.27
LINC00393-202ENST00000452852 CHRNA4P43681 627 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 RAC1P63000 192 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 GRIK4Q16099 956 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 CEP135Q66GS9 1140 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 CD163Q86VB7 1156 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 PMEPA1Q969W9 287 aa7.11□□□□□ -1.27
LINC00393-202ENST00000452852 EREGO14944 169 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 NDUFB5O43674 189 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 PHACTR2O75167 634 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
LINC00393-202ENST00000452852 IL22RA1Q8N6P7 574 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
LINC00393-202ENST00000452852 SMNDC1O75940 238 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00393-202ENST00000452852 ACPPP15309 386 aa7.09□□□□□ -1.27
LINC00393-202ENST00000452852 ADAMTSL4Q6UY14 1074 aa7.09□□□□□ -1.27
LINC00393-202ENST00000452852 PBX4Q9BYU1 374 aa7.09□□□□□ -1.27
LINC00393-202ENST00000452852 LACRTQ9GZZ8 138 aa7.09□□□□□ -1.27
LINC00393-202ENST00000452852 TRPA1O75762 1119 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 APBA3O96018 575 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 ELNP15502 786 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 CCDC27Q2M243 656 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 DTWD1Q8N5C7 304 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 POP1Q99575 1024 aaKnown RBP7.08□□□□□ -1.28
LINC00393-202ENST00000452852 ZFYVE28Q9HCC9 887 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
LINC00393-202ENST00000452852 SMARCA4P51532 1647 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 SMARCA2P51531 1590 aa7.08□□□□□ -1.28
LINC00393-202ENST00000452852 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
LINC00393-202ENST00000452852 SELPP16109 830 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00393-202ENST00000452852 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 TMC1Q8TDI8 760 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 DZANK1Q9NVP4 752 aa7.07□□□□□ -1.28
LINC00393-202ENST00000452852 NFKBIEO00221 500 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 HHIPQ96QV1 700 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 NACC1Q96RE7 527 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 LATS2Q9NRM7 1088 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 AMOTL2Q9Y2J4 779 aa7.06□□□□□ -1.28
LINC00393-202ENST00000452852 NCAPD3P42695 1498 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 ERCC6Q03468 1493 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 C9orf172C9J069 976 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 E9PSI1 815 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 LINC01387J3KSC0 135 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 GPR182O15218 404 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 IGHA2P01877 340 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 POLR3DP05423 398 aaPredicted RBP7.05□□□□□ -1.28
LINC00393-202ENST00000452852 EDN3P14138 238 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 CDC27P30260 824 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 CDC25BP30305 580 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 OSMRQ99650 979 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 ZKSCAN3Q9BRR0 538 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 PPME1Q9Y570 386 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 HMGXB3Q12766 1538 aa7.05□□□□□ -1.28
LINC00393-202ENST00000452852 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 BAZ1AQ9NRL2 1556 aaPredicted RBP7.04□□□□□ -1.28
LINC00393-202ENST00000452852 PDE2AO00408 941 aaPredicted RBP7.04□□□□□ -1.28
LINC00393-202ENST00000452852 PTPRAP18433 802 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 GATA4P43694 442 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 ORC1Q13415 861 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 USPL1Q5W0Q7 1092 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 TXNDC11Q6PKC3 985 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 LENG1Q96BZ8 264 aaPredicted RBP7.04□□□□□ -1.28
LINC00393-202ENST00000452852 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 ADAM19Q9H013 955 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms