RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PPP1R9BQ96SB3 815 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
SF1-211ENST00000448404 ATP2B3Q16720 1220 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
SF1-211ENST00000448404 ABCC6O95255 1503 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 PHKA1P46020 1223 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 HMG20BQ9P0W2 317 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 USP25Q9UHP3 1055 aa17.55■□□□□ 0.4
SF1-211ENST00000448404 A0A087WWV3 80 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
SF1-211ENST00000448404 CTDNEP1O95476 244 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 CKAP2LQ8IYA6 745 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 PALLDQ8WX93 1383 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 RXRAP19793 462 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 CTSWP56202 376 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 UBE2HP62256 183 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 RIPOR2Q9Y4F9 1068 aa17.54■□□□□ 0.4
SF1-211ENST00000448404 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 BCL9O00512 1426 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 CSF1RP07333 972 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 CCDC24Q8N4L8 307 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 FGAP02671 866 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
SF1-211ENST00000448404 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
SF1-211ENST00000448404 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
SF1-211ENST00000448404 ITPK1Q13572 414 aa17.52■□□□□ 0.4
SF1-211ENST00000448404 TSGA10IPQ3SY00 556 aa17.52■□□□□ 0.4
SF1-211ENST00000448404 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
SF1-211ENST00000448404 CIAO1O76071 339 aa17.52■□□□□ 0.4
SF1-211ENST00000448404 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.4
SF1-211ENST00000448404 DHX32Q7L7V1 743 aaKnown RBP17.51■□□□□ 0.39
SF1-211ENST00000448404 TMEM87AQ8NBN3 555 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
SF1-211ENST00000448404 ANKRD1Q15327 319 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 CCDC183Q5T5S1 534 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 H3BQV1 296 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 GPR108Q9NPR9 543 aa17.51■□□□□ 0.39
SF1-211ENST00000448404 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 GPAA1O43292 621 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 APPP05067 770 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 KRT32Q14532 448 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 DDB1Q16531 1140 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 ERCC4Q92889 916 aaPredicted RBP17.5■□□□□ 0.39
SF1-211ENST00000448404 SENP2Q9HC62 589 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 AP5Z1O43299 807 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
SF1-211ENST00000448404 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
SF1-211ENST00000448404 FAM184AQ8NB25 1140 aa17.5■□□□□ 0.39
SF1-211ENST00000448404 NSUN7Q8NE18 718 aaKnown RBP17.5■□□□□ 0.39
SF1-211ENST00000448404 SLIT2O94813 1529 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
SF1-211ENST00000448404 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
SF1-211ENST00000448404 PGBD1Q96JS3 809 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 KRT85P78386 507 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 EXOSC10Q01780 885 aaKnown RBP17.49■□□□□ 0.39
SF1-211ENST00000448404 SLC51AQ86UW1 340 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 SPATA32Q96LK8 384 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
SF1-211ENST00000448404 DACT1Q9NYF0 836 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 ATP6V1DQ9Y5K8 247 aa17.49■□□□□ 0.39
SF1-211ENST00000448404 ITGB4P16144 1822 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 CCDC102BQ68D86 513 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 C17orf53Q8N3J3 647 aaPredicted RBP17.48■□□□□ 0.39
SF1-211ENST00000448404 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 DSCC1Q9BVC3 393 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
SF1-211ENST00000448404 LEO1Q8WVC0 666 aaPredicted RBP17.48■□□□□ 0.39
SF1-211ENST00000448404 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
SF1-211ENST00000448404 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
SF1-211ENST00000448404 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
SF1-211ENST00000448404 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
SF1-211ENST00000448404 NR1I2O75469 434 aa17.47■□□□□ 0.39
SF1-211ENST00000448404 C3orf67Q6ZVT6 689 aa17.47■□□□□ 0.39
SF1-211ENST00000448404 NBPF3Q9H094 633 aa17.47■□□□□ 0.39
SF1-211ENST00000448404 ANTXR2P58335 489 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 AIFM3Q96NN9 605 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 PDE8BO95263 885 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 SIK1P57059 783 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 RESTQ13127 1097 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
SF1-211ENST00000448404 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
SF1-211ENST00000448404 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
SF1-211ENST00000448404 BCAMP50895 628 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms