RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
AC004540.1-206ENST00000448056 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
AC004540.1-206ENST00000448056 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-206ENST00000448056 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 EYA2O00167 538 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 SURF6O75683 361 aaKnown RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 CIAO1O76071 339 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 G3BP1Q13283 466 aaKnown RBP eCLIP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 ERICH6BQ5W0A0 696 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 ATG9AQ7Z3C6 839 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 SLC51AQ86UW1 340 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 SIL1Q9H173 461 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 LAMB2P55268 1798 aa9.36□□□□□ -0.91
AC004540.1-206ENST00000448056 MROH5Q6ZUA9 1318 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 IGHDP01880 384 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 IL15P40933 162 aaPredicted RBP9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 GPSM2P81274 684 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 CHRNDQ07001 517 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 RTKN2Q8IZC4 609 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 ANKRD2Q9GZV1 360 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 KIAA1551Q9HCM1 1747 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 COL4A1P02462 1669 aa9.35□□□□□ -0.91
AC004540.1-206ENST00000448056 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 TAF5LO75529 589 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 GPR162Q16538 588 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 HSP90AB4PQ58FF6 505 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 METTL24Q5JXM2 366 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 MPNDQ8N594 471 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 HELBQ8NG08 1087 aaPredicted RBP9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 CEP126Q9P2H0 1117 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 EXOC6BQ9Y2D4 811 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 MYH3P11055 1940 aa9.34□□□□□ -0.91
AC004540.1-206ENST00000448056 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 WTIPA6NIX2 430 aaPredicted RBP9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 SASH1O94885 1247 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 PDE8BO95263 885 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 SEC24BO95487 1268 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 PLCG2P16885 1265 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 TFCP2Q12800 502 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 OS9Q13438 667 aaPredicted RBP9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 VGLL2Q8N8G2 317 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 RTFDC1Q9BY42 306 aaPredicted RBP9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 POLLQ9UGP5 575 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 METRNQ9UJH8 293 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 TAF1P21675 1872 aa9.33□□□□□ -0.92
AC004540.1-206ENST00000448056 XDHP47989 1333 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 SNAP23O00161 211 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 ERC1Q8IUD2 1116 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 TBC1D16Q8TBP0 767 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 PSMD1Q99460 953 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 GGA1Q9UJY5 639 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
AC004540.1-206ENST00000448056 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 APBB1O00213 710 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 UFL1O94874 794 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 FGFR2P21802 821 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 KCNJ4P48050 445 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 TIMM10P62072 90 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 PUM3Q15397 648 aaKnown RBP9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 SMC5Q8IY18 1101 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 SUPT20HQ8NEM7 779 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 TMEM121BQ9BXQ6 578 aaPredicted RBP9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 AKAP2Q9Y2D5 859 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 SNED1Q8TER0 1413 aa9.31□□□□□ -0.92
AC004540.1-206ENST00000448056 UTRNP46939 3433 aa9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 NFKBIEO00221 500 aa9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 WASHC4Q2M389 1173 aa9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 LPIN2Q92539 896 aa9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 CCDC136Q96JN2 1154 aa9.3□□□□□ -0.92
AC004540.1-206ENST00000448056 EYA3Q99504 573 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms