RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
GNE-203ENST00000447283 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
GNE-203ENST00000447283 RGL2O15211 777 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 ZPR1O75312 459 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
GNE-203ENST00000447283 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
GNE-203ENST00000447283 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 RBM8AQ9Y5S9 174 aaKnown RBP13.56□□□□□ -0.24
GNE-203ENST00000447283 ELP1O95163 1332 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 TPM3P06753 285 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 EPHA10Q5JZY3 1008 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
GNE-203ENST00000447283 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
GNE-203ENST00000447283 CCDC192P0DO97 292 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 ADRA2BP18089 450 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 PSMA5P28066 241 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 RFC4P35249 363 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 AACSQ86V21 672 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 TPCN1Q9ULQ1 816 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
GNE-203ENST00000447283 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 PDCP20941 246 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
GNE-203ENST00000447283 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 MPNDQ8N594 471 aa13.55□□□□□ -0.24
GNE-203ENST00000447283 C4BP0C0L5 1744 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 SLC27A2O14975 620 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 AP5Z1O43299 807 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 KRT85P78386 507 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
GNE-203ENST00000447283 TAF1LQ8IZX4 1826 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 FOXO4P98177 505 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 NMIQ13287 307 aaPredicted RBP13.54□□□□□ -0.24
GNE-203ENST00000447283 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 PKNOX2Q96KN3 472 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 FAM227BQ96M60 508 aa13.54□□□□□ -0.24
GNE-203ENST00000447283 SRP68Q9UHB9 627 aaKnown RBP13.54□□□□□ -0.24
GNE-203ENST00000447283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
GNE-203ENST00000447283 SASH1O94885 1247 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 KIAA1524Q8TCG1 905 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
GNE-203ENST00000447283 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 NUP98P52948 1817 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
GNE-203ENST00000447283 KCNJ4P48050 445 aa13.52□□□□□ -0.24
GNE-203ENST00000447283 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.24
GNE-203ENST00000447283 RNF20Q5VTR2 975 aa13.52□□□□□ -0.24
GNE-203ENST00000447283 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.24
GNE-203ENST00000447283 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.24
GNE-203ENST00000447283 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.24
GNE-203ENST00000447283 G3BP1Q13283 466 aaKnown RBP eCLIP13.52□□□□□ -0.25
GNE-203ENST00000447283 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
GNE-203ENST00000447283 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
GNE-203ENST00000447283 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
GNE-203ENST00000447283 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
GNE-203ENST00000447283 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 GOLGA6L6A8MZA4 724 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
GNE-203ENST00000447283 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
GNE-203ENST00000447283 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 NUP62CLQ9H1M0 184 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 CAMKK2Q96RR4 588 aa13.51□□□□□ -0.25
GNE-203ENST00000447283 SCAND2PQ9GZW5 306 aaPredicted RBP13.51□□□□□ -0.25
GNE-203ENST00000447283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
GNE-203ENST00000447283 DTNBO60941 627 aa13.5□□□□□ -0.25
GNE-203ENST00000447283 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
GNE-203ENST00000447283 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
GNE-203ENST00000447283 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
GNE-203ENST00000447283 MRVI1Q9Y6F6 885 aa13.5□□□□□ -0.25
GNE-203ENST00000447283 PDE8AO60658 829 aa13.49□□□□□ -0.25
GNE-203ENST00000447283 NTSR2O95665 410 aa13.49□□□□□ -0.25
GNE-203ENST00000447283 CSF1RP07333 972 aa13.49□□□□□ -0.25
GNE-203ENST00000447283 LIG1P18858 919 aa13.49□□□□□ -0.25
GNE-203ENST00000447283 TYRO3Q06418 890 aa13.49□□□□□ -0.25
GNE-203ENST00000447283 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
GNE-203ENST00000447283 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms