RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PTPN12Q05209 780 aaKnown RBP21.35■■□□□ 1.01
LIME1-202ENST00000444951 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
LIME1-202ENST00000444951 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
LIME1-202ENST00000444951 CNNM1Q9NRU3 951 aa21.35■■□□□ 1.01
LIME1-202ENST00000444951 GPRC5DQ9NZD1 345 aa21.35■■□□□ 1.01
LIME1-202ENST00000444951 ZNRF3Q9ULT6 936 aa21.35■■□□□ 1.01
LIME1-202ENST00000444951 YDJCA8MPS7 323 aa21.34■■□□□ 1.01
LIME1-202ENST00000444951 FOXN1O15353 648 aa21.34■■□□□ 1.01
LIME1-202ENST00000444951 SURF6O75683 361 aaKnown RBP21.34■■□□□ 1.01
LIME1-202ENST00000444951 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
LIME1-202ENST00000444951 KIAA2012Q0VF49 1180 aa21.34■■□□□ 1.01
LIME1-202ENST00000444951 OS9Q13438 667 aaPredicted RBP21.34■■□□□ 1.01
LIME1-202ENST00000444951 LDHAL6AQ6ZMR3 332 aa21.34■■□□□ 1.01
LIME1-202ENST00000444951 SUPT20HQ8NEM7 779 aa21.34■■□□□ 1.01
LIME1-202ENST00000444951 APBB1O00213 710 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 TRAF5O00463 557 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 CAPN15O75808 1086 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 RAD17O75943 681 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 LRRC24Q50LG9 513 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 RWDD1Q9H446 243 aaPredicted RBP21.33■■□□□ 1.01
LIME1-202ENST00000444951 EXOC6BQ9Y2D4 811 aa21.33■■□□□ 1.01
LIME1-202ENST00000444951 SHTN1A0MZ66 631 aa21.32■■□□□ 1
LIME1-202ENST00000444951 RASSF10A6NK89 507 aa21.32■■□□□ 1
LIME1-202ENST00000444951 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
LIME1-202ENST00000444951 USP50Q70EL3 339 aaPredicted RBP21.32■■□□□ 1
LIME1-202ENST00000444951 COPRSQ9NQ92 184 aa21.32■■□□□ 1
LIME1-202ENST00000444951 TRPM7Q96QT4 1865 aa21.32■■□□□ 1
LIME1-202ENST00000444951 IGHDP01880 384 aa21.31■■□□□ 1
LIME1-202ENST00000444951 EYA2O00167 538 aa21.3■■□□□ 1
LIME1-202ENST00000444951 CIAPIN1Q6FI81 312 aa21.3■■□□□ 1
LIME1-202ENST00000444951 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
LIME1-202ENST00000444951 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
LIME1-202ENST00000444951 BSDC1Q9NW68 430 aaPredicted RBP21.3■■□□□ 1
LIME1-202ENST00000444951 GPSM2P81274 684 aa21.29■■□□□ 1
LIME1-202ENST00000444951 HDAC1Q13547 482 aaPredicted RBP21.29■■□□□ 1
LIME1-202ENST00000444951 DEFB115Q30KQ5 88 aa21.29■■□□□ 1
LIME1-202ENST00000444951 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
LIME1-202ENST00000444951 CST9Q5W186 159 aa21.29■■□□□ 1
LIME1-202ENST00000444951 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
LIME1-202ENST00000444951 TRPM4Q8TD43 1214 aa21.29■■□□□ 1
LIME1-202ENST00000444951 GPR101Q96P66 508 aaPredicted RBP21.29■■□□□ 1
LIME1-202ENST00000444951 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
LIME1-202ENST00000444951 HIRAP54198 1017 aaPredicted RBP21.28■■□□□ 1
LIME1-202ENST00000444951 METTL24Q5JXM2 366 aa21.28■■□□□ 1
LIME1-202ENST00000444951 B4GALNT3Q6L9W6 998 aa21.28■■□□□ 1
LIME1-202ENST00000444951 ATG9AQ7Z3C6 839 aa21.28■■□□□ 1
LIME1-202ENST00000444951 TMC4Q7Z404 712 aa21.28■■□□□ 1
LIME1-202ENST00000444951 PPP4R2Q9NY27 417 aa21.28■■□□□ 1
LIME1-202ENST00000444951 POLLQ9UGP5 575 aa21.28■■□□□ 1
LIME1-202ENST00000444951 WBP1LQ9NX94 342 aa21.27■■□□□ 1
LIME1-202ENST00000444951 MINPP1Q9UNW1 487 aa21.27■■□□□ 1
LIME1-202ENST00000444951 NSFL1CQ9UNZ2 370 aaKnown RBP21.27■■□□□ 1
LIME1-202ENST00000444951 RIPOR2Q9Y4F9 1068 aa21.27■■□□□ 1
LIME1-202ENST00000444951 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
LIME1-202ENST00000444951 WDR33Q9C0J8 1336 aaKnown RBP21.27■□□□□ 0.99
LIME1-202ENST00000444951 RIMBP2O15034 1052 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 TAF5LO75529 589 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 CIAO1O76071 339 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 IL15P40933 162 aaPredicted RBP21.26■□□□□ 0.99
LIME1-202ENST00000444951 CHRNDQ07001 517 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 GLIS2Q9BZE0 524 aaPredicted RBP21.26■□□□□ 0.99
LIME1-202ENST00000444951 DCTPP1Q9H773 170 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 DBNDD1Q9H9R9 158 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 ANKIB1Q9P2G1 1089 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 NOP58Q9Y2X3 529 aaKnown RBP21.26■□□□□ 0.99
LIME1-202ENST00000444951 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
LIME1-202ENST00000444951 THSD7BQ9C0I4 1608 aa21.26■□□□□ 0.99
LIME1-202ENST00000444951 SCN9AQ15858 1988 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 TFCP2Q12800 502 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 TNIP1Q15025 636 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 HSP90AB4PQ58FF6 505 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 KCNQ5Q9NR82 932 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 MROH5Q6ZUA9 1318 aa21.25■□□□□ 0.99
LIME1-202ENST00000444951 PSMD14O00487 310 aa21.24■□□□□ 0.99
LIME1-202ENST00000444951 WASHC4Q2M389 1173 aa21.24■□□□□ 0.99
LIME1-202ENST00000444951 CEP126Q9P2H0 1117 aa21.24■□□□□ 0.99
LIME1-202ENST00000444951 CNOT7Q9UIV1 285 aaKnown RBP21.24■□□□□ 0.99
LIME1-202ENST00000444951 FBXO3Q9UK99 471 aa21.24■□□□□ 0.99
LIME1-202ENST00000444951 C6orf229H3BNL8 230 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 SMARCA5O60264 1052 aaPredicted RBP21.23■□□□□ 0.99
LIME1-202ENST00000444951 SASH1O94885 1247 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 DOK7Q18PE1 504 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 CYP4F22Q6NT55 531 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 ANKRD2Q9GZV1 360 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 PGAP2Q9UHJ9 254 aa21.23■□□□□ 0.99
LIME1-202ENST00000444951 SNAP23O00161 211 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 KCNJ4P48050 445 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 CTCFP49711 727 aaPredicted RBP21.22■□□□□ 0.99
LIME1-202ENST00000444951 DLK2Q6UY11 383 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 ERC1Q8IUD2 1116 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 MICALL2Q8IY33 904 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 TBC1D16Q8TBP0 767 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 CAPNS2Q96L46 248 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 IL1RAPL2Q9NP60 686 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 TLL2Q9Y6L7 1015 aa21.22■□□□□ 0.99
LIME1-202ENST00000444951 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
LIME1-202ENST00000444951 WTIPA6NIX2 430 aaPredicted RBP21.21■□□□□ 0.99
LIME1-202ENST00000444951 ECE2O60344 883 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms