RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 PIAS4Q8N2W9 510 aaPredicted RBP11.07□□□□□ -0.64
USP6NL-203ENST00000443016 ANKRD2Q9GZV1 360 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
USP6NL-203ENST00000443016 CSF1RP07333 972 aa11.06□□□□□ -0.64
USP6NL-203ENST00000443016 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
USP6NL-203ENST00000443016 WTIPA6NIX2 430 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-203ENST00000443016 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
USP6NL-203ENST00000443016 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
USP6NL-203ENST00000443016 LEMD3Q9Y2U8 911 aa11.06□□□□□ -0.64
USP6NL-203ENST00000443016 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 RASSF10A6NK89 507 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 RSBN1LQ6PCB5 846 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-203ENST00000443016 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 AIDAQ96BJ3 306 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 DCPSQ96C86 337 aaKnown RBP11.05□□□□□ -0.64
USP6NL-203ENST00000443016 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 MYH3P11055 1940 aa11.05□□□□□ -0.64
USP6NL-203ENST00000443016 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 EGFRP00533 1210 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-203ENST00000443016 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 CST9Q5W186 159 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 KRT26Q7Z3Y9 468 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 PGAP2Q9UHJ9 254 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 CHRNDQ07001 517 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
USP6NL-203ENST00000443016 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 ECE1P42892 770 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 FOXO4P98177 505 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-203ENST00000443016 LDHAL6AQ6ZMR3 332 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 WDR33Q9C0J8 1336 aaKnown RBP11.03□□□□□ -0.64
USP6NL-203ENST00000443016 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 PTPRCP08575 1304 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 TAF5LO75529 589 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
USP6NL-203ENST00000443016 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-203ENST00000443016 SSH1Q8WYL5 1049 aa11.03□□□□□ -0.64
USP6NL-203ENST00000443016 PLIN1O60240 522 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 CAPNS2Q96L46 248 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 SMC4Q9NTJ3 1288 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.64
USP6NL-203ENST00000443016 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-203ENST00000443016 EPHA10Q5JZY3 1008 aa11.02□□□□□ -0.65
USP6NL-203ENST00000443016 TTLL5Q6EMB2 1281 aa11.02□□□□□ -0.65
USP6NL-203ENST00000443016 SAPCD2Q86UD0 394 aa11.02□□□□□ -0.65
USP6NL-203ENST00000443016 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-203ENST00000443016 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.65
USP6NL-203ENST00000443016 GGA3Q9NZ52 723 aa11.02□□□□□ -0.65
USP6NL-203ENST00000443016 NBPF7P0C2Y1 421 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-203ENST00000443016 MAP2K1Q02750 393 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-203ENST00000443016 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 MYOZ2Q9NPC6 264 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 SCN9AQ15858 1988 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 SNAP23O00161 211 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 KLRK1P26718 216 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 SCARF1Q14162 830 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 DLK2Q6UY11 383 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 ZMYND15Q9H091 742 aa11.01□□□□□ -0.65
USP6NL-203ENST00000443016 MYO3BQ8WXR4 1341 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 ADM5C9JUS6 153 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 ZNF280AP59817 542 aaPredicted RBP11□□□□□ -0.65
USP6NL-203ENST00000443016 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
USP6NL-203ENST00000443016 TNS4Q8IZW8 715 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 SUCLG2Q96I99 432 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 MXD3Q9BW11 206 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 FOXN1O15353 648 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 HUNKP57058 714 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 GTF2IP78347 998 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 DACT2Q5SW24 774 aa11□□□□□ -0.65
USP6NL-203ENST00000443016 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
USP6NL-203ENST00000443016 ZNF804AQ7Z570 1209 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 KIAA0825Q8IV33 1275 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 C2orf69Q8N8R5 385 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 GMLQ99445 158 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 CD209Q9NNX6 404 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 HDAC9Q9UKV0 1011 aa10.99□□□□□ -0.65
USP6NL-203ENST00000443016 CTCFP49711 727 aaPredicted RBP10.99□□□□□ -0.65
USP6NL-203ENST00000443016 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
USP6NL-203ENST00000443016 GBA2Q9HCG7 927 aaPredicted RBP10.98□□□□□ -0.65
USP6NL-203ENST00000443016 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
USP6NL-203ENST00000443016 CT47B1P0C2W7 299 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms