RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CRAMP1Q96RY5 1269 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 CDC5LQ99459 802 aaKnown RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 MINPP1Q9UNW1 487 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 YDJCA8MPS7 323 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 H7C1W4 665 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 TRAF5O00463 557 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 PSMD14O00487 310 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 ECE2O60344 883 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 GMPSP49915 693 aaPredicted RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 CCT4P50991 539 aaKnown RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 SLC10A5Q5PT55 438 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 DCTPP1Q9H773 170 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 MKRN1Q9UHC7 482 aaKnown RBP5.81□□□□□ -1.48
EDEM3-203ENST00000439962 FZD1Q9UP38 647 aa5.81□□□□□ -1.48
EDEM3-203ENST00000439962 LAMB4A4D0S4 1761 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 KLRG2A4D1S0 409 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 SRGAP3O43295 1099 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 LMOD1P29536 600 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 HOXA10P31260 410 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 GTF2IP78347 998 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 FOXO4P98177 505 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 OS9Q13438 667 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 SF3B3Q15393 1217 aaKnown RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 SP8Q8IXZ3 490 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 ANKRD44Q8N8A2 993 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 KAZALD1Q96I82 304 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 CHMP5Q9NZZ3 219 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 ASTN2O75129 1339 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 HMMRO75330 724 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 ECM2O94769 699 aaPredicted RBP5.8□□□□□ -1.48
EDEM3-203ENST00000439962 SCNN1DP51172 638 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 SOGA3Q5TF21 947 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 NEUROD6Q96NK8 337 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 PCDHAC2Q9Y5I4 1007 aa5.8□□□□□ -1.48
EDEM3-203ENST00000439962 EPHX2P34913 555 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 TRIM28Q13263 835 aaKnown RBP5.79□□□□□ -1.48
EDEM3-203ENST00000439962 MICALL2Q8IY33 904 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 OSBPL3Q9H4L5 887 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 AOX1Q06278 1338 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 ZNF831Q5JPB2 1677 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 POTECB2RU33 542 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 CDC45O75419 566 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 TOMM70O94826 608 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 MKRN3Q13064 507 aaKnown RBP5.79□□□□□ -1.48
EDEM3-203ENST00000439962 L1TD1Q5T7N2 865 aaKnown RBP5.79□□□□□ -1.48
EDEM3-203ENST00000439962 CIAPIN1Q6FI81 312 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 CLEC17AQ6ZS10 378 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 SKAP1Q86WV1 359 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 HSCBQ8IWL3 235 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 TRPM4Q8TD43 1214 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 TBC1D2Q9BYX2 928 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 CNOT7Q9UIV1 285 aaKnown RBP5.79□□□□□ -1.48
EDEM3-203ENST00000439962 ZNRF3Q9ULT6 936 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 NDUFB9Q9Y6M9 179 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 HTTP42858 3142 aa5.79□□□□□ -1.48
EDEM3-203ENST00000439962 BCORQ6W2J9 1755 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 ARFGEF2Q9Y6D5 1785 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 DDX11L8A8MPP1 907 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 SASH1O94885 1247 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 SEC24BO95487 1268 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 DDIT3P35638 169 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 BCAMP50895 628 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 CASP7P55210 303 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 TIMM10P62072 90 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 TTLL5Q6EMB2 1281 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 IL17RAQ96F46 866 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 GLIS2Q9BZE0 524 aaPredicted RBP5.78□□□□□ -1.48
EDEM3-203ENST00000439962 HACL1Q9UJ83 578 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 ABT1Q9ULW3 272 aaKnown RBP5.78□□□□□ -1.48
EDEM3-203ENST00000439962 ZNF804BA4D1E1 1349 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 COL4A5P29400 1685 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 PNMA6EA0A0J9YXQ4 647 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 KIAA2012Q0VF49 1180 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 CASC1Q6TDU7 716 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 TAF1DQ9H5J8 278 aaPredicted RBP5.78□□□□□ -1.48
EDEM3-203ENST00000439962 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
EDEM3-203ENST00000439962 EXOC6BQ9Y2D4 811 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.78□□□□□ -1.48
EDEM3-203ENST00000439962 XDHP47989 1333 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 DNAH12Q6ZR08 3092 aa5.78□□□□□ -1.48
EDEM3-203ENST00000439962 CLRN2A0PK11 232 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 HSP90B1P14625 803 aaKnown RBP5.77□□□□□ -1.49
EDEM3-203ENST00000439962 CACNB3P54284 484 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 PSMD1Q99460 953 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 LAMA3Q16787 3333 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 SKOR2Q2VWA4 1001 aaPredicted RBP5.77□□□□□ -1.49
EDEM3-203ENST00000439962 GORABQ5T7V8 394 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 CNTROBQ8N137 903 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 VEZTQ9HBM0 779 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 IL1RAPL2Q9NP60 686 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 SNRKQ9NRH2 765 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 ABCF2Q9UG63 623 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 TSKSQ9UJT2 592 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 KIAA1551Q9HCM1 1747 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 BRCA1P38398 1863 aaKnown RBP5.77□□□□□ -1.49
EDEM3-203ENST00000439962 ADM5C9JUS6 153 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 H7C1D1 291 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 FZD9O00144 591 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms