RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ITPRIPQ8IWB1 547 aa22.11■■□□□ 1.13
CCDC188-201ENST00000439765 HELBQ8NG08 1087 aaPredicted RBP22.11■■□□□ 1.13
CCDC188-201ENST00000439765 KLHDC4Q8TBB5 520 aa22.11■■□□□ 1.13
CCDC188-201ENST00000439765 ZC3H12CQ9C0D7 883 aaKnown RBP22.11■■□□□ 1.13
CCDC188-201ENST00000439765 ANKRD2Q9GZV1 360 aa22.11■■□□□ 1.13
CCDC188-201ENST00000439765 THSD7BQ9C0I4 1608 aa22.11■■□□□ 1.13
CCDC188-201ENST00000439765 ZNF646O15015 1829 aaPredicted RBP22.11■■□□□ 1.13
CCDC188-201ENST00000439765 RASSF10A6NK89 507 aa22.1■■□□□ 1.13
CCDC188-201ENST00000439765 ECE2O60344 883 aa22.1■■□□□ 1.13
CCDC188-201ENST00000439765 TAF5LO75529 589 aa22.1■■□□□ 1.13
CCDC188-201ENST00000439765 MED23Q9ULK4 1368 aa22.1■■□□□ 1.13
CCDC188-201ENST00000439765 KCNJ4P48050 445 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 PANK1Q8TE04 598 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 PUS3Q9BZE2 481 aaKnown RBP22.09■■□□□ 1.13
CCDC188-201ENST00000439765 PGAP2Q9UHJ9 254 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 SNAP23O00161 211 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 PLIN1O60240 522 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 KLRK1P26718 216 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 ZC3H15Q8WU90 426 aaKnown RBP22.09■■□□□ 1.13
CCDC188-201ENST00000439765 DPF2Q92785 391 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 HDAC5Q9UQL6 1122 aa22.09■■□□□ 1.13
CCDC188-201ENST00000439765 ZNF804BA4D1E1 1349 aa22.08■■□□□ 1.13
CCDC188-201ENST00000439765 G3V3G9 751 aa22.08■■□□□ 1.12
CCDC188-201ENST00000439765 PSMD14O00487 310 aa22.08■■□□□ 1.12
CCDC188-201ENST00000439765 DCAF8Q5TAQ9 597 aa22.08■■□□□ 1.12
CCDC188-201ENST00000439765 CNOT7Q9UIV1 285 aaKnown RBP22.08■■□□□ 1.12
CCDC188-201ENST00000439765 VEGFBP49765 207 aa22.07■■□□□ 1.12
CCDC188-201ENST00000439765 LEMD3Q9Y2U8 911 aa22.07■■□□□ 1.12
CCDC188-201ENST00000439765 ZNF609O15014 1411 aa22.07■■□□□ 1.12
CCDC188-201ENST00000439765 RPS12P25398 132 aaKnown RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 RFX5P48382 616 aaPredicted RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 HIRAP54198 1017 aaPredicted RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 RRP1P56182 461 aaKnown RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 DEFB115Q30KQ5 88 aa22.06■■□□□ 1.12
CCDC188-201ENST00000439765 LRRC24Q50LG9 513 aa22.06■■□□□ 1.12
CCDC188-201ENST00000439765 COL13A1Q5TAT6 717 aaPredicted RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 TXNRD3Q86VQ6 643 aa22.06■■□□□ 1.12
CCDC188-201ENST00000439765 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
CCDC188-201ENST00000439765 TRPM4Q8TD43 1214 aa22.06■■□□□ 1.12
CCDC188-201ENST00000439765 H7C1D1 291 aa22.05■■□□□ 1.12
CCDC188-201ENST00000439765 GNAI2P04899 355 aa22.05■■□□□ 1.12
CCDC188-201ENST00000439765 FMR1Q06787 632 aaKnown RBP eCLIP22.05■■□□□ 1.12
CCDC188-201ENST00000439765 MICALL2Q8IY33 904 aa22.05■■□□□ 1.12
CCDC188-201ENST00000439765 KCNQ5Q9NR82 932 aa22.05■■□□□ 1.12
CCDC188-201ENST00000439765 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
CCDC188-201ENST00000439765 SHTN1A0MZ66 631 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 TRAF5O00463 557 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 SIL1Q9H173 461 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 C1orf115Q9H7X2 142 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 ABT1Q9ULW3 272 aaKnown RBP22.04■■□□□ 1.12
CCDC188-201ENST00000439765 RIPOR2Q9Y4F9 1068 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 MYH13Q9UKX3 1938 aa22.04■■□□□ 1.12
CCDC188-201ENST00000439765 MROH5Q6ZUA9 1318 aa22.03■■□□□ 1.12
CCDC188-201ENST00000439765 PTPN12Q05209 780 aaKnown RBP22.03■■□□□ 1.12
CCDC188-201ENST00000439765 CST9Q5W186 159 aa22.03■■□□□ 1.12
CCDC188-201ENST00000439765 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
CCDC188-201ENST00000439765 METTL24Q5JXM2 366 aa22.03■■□□□ 1.12
CCDC188-201ENST00000439765 VIL1P09327 827 aaKnown RBP22.02■■□□□ 1.12
CCDC188-201ENST00000439765 MS4A1P11836 297 aa22.02■■□□□ 1.12
CCDC188-201ENST00000439765 GLIS2Q9BZE0 524 aaPredicted RBP22.02■■□□□ 1.12
CCDC188-201ENST00000439765 PA2G4Q9UQ80 394 aaKnown RBP22.02■■□□□ 1.12
CCDC188-201ENST00000439765 ARAP2Q8WZ64 1704 aa22.01■■□□□ 1.11
CCDC188-201ENST00000439765 IRS2Q9Y4H2 1338 aa22.01■■□□□ 1.11
CCDC188-201ENST00000439765 CDC37L1Q7L3B6 337 aa22.01■■□□□ 1.11
CCDC188-201ENST00000439765 WDR33Q9C0J8 1336 aaKnown RBP22■■□□□ 1.11
CCDC188-201ENST00000439765 EYA2O00167 538 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 ZBTB7BO15156 539 aaPredicted RBP22■■□□□ 1.11
CCDC188-201ENST00000439765 MTX1Q13505 466 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 SAMD7Q7Z3H4 446 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 COG6Q9Y2V7 657 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 TLL2Q9Y6L7 1015 aa22■■□□□ 1.11
CCDC188-201ENST00000439765 PNMA6EA0A0J9YXQ4 647 aa21.99■■□□□ 1.11
CCDC188-201ENST00000439765 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
CCDC188-201ENST00000439765 PODNQ7Z5L7 613 aa21.99■■□□□ 1.11
CCDC188-201ENST00000439765 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
CCDC188-201ENST00000439765 EGFRP00533 1210 aa21.98■■□□□ 1.11
CCDC188-201ENST00000439765 FBXW7Q969H0 707 aa21.98■■□□□ 1.11
CCDC188-201ENST00000439765 COA1Q9GZY4 146 aa21.98■■□□□ 1.11
CCDC188-201ENST00000439765 WBP1LQ9NX94 342 aa21.98■■□□□ 1.11
CCDC188-201ENST00000439765 FOXN1O15353 648 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 PDE8BO95263 885 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 CELF2O95319 508 aaKnown RBP21.97■■□□□ 1.11
CCDC188-201ENST00000439765 ECE1P42892 770 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 UBE4AQ14139 1066 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 TBC1D10BQ4KMP7 808 aaPredicted RBP21.97■■□□□ 1.11
CCDC188-201ENST00000439765 ATG9AQ7Z3C6 839 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 AGBL3Q8NEM8 1001 aa21.97■■□□□ 1.11
CCDC188-201ENST00000439765 PDE3AQ14432 1141 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 C15orf52Q6ZUT6 534 aaKnown RBP21.96■■□□□ 1.11
CCDC188-201ENST00000439765 ZNF804AQ7Z570 1209 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 SAPCD2Q86UD0 394 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 HHIPL1Q96JK4 782 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 CAPNS2Q96L46 248 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 USP17L3A6NCW0 530 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 USP17L4A6NCW7 530 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 CIAO1O76071 339 aa21.96■■□□□ 1.11
CCDC188-201ENST00000439765 RSBN1LQ6PCB5 846 aaPredicted RBP21.96■■□□□ 1.11
CCDC188-201ENST00000439765 USP17L1Q7RTZ2 530 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms