RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MED23Q9ULK4 1368 aa21.81■■□□□ 1.08
CPSF4-203ENST00000430038 PODNQ7Z5L7 613 aa21.8■■□□□ 1.08
CPSF4-203ENST00000430038 AGBL3Q8NEM8 1001 aa21.8■■□□□ 1.08
CPSF4-203ENST00000430038 MYH16Q9H6N6 1097 aa21.8■■□□□ 1.08
CPSF4-203ENST00000430038 IRS2Q9Y4H2 1338 aa21.8■■□□□ 1.08
CPSF4-203ENST00000430038 USP17L3A6NCW0 530 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 USP17L4A6NCW7 530 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
CPSF4-203ENST00000430038 SCARF1Q14162 830 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 DACT2Q5SW24 774 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 USP17L1Q7RTZ2 530 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 AIDAQ96BJ3 306 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 GGA3Q9NZ52 723 aa21.79■■□□□ 1.08
CPSF4-203ENST00000430038 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
CPSF4-203ENST00000430038 ECE1P42892 770 aa21.78■■□□□ 1.08
CPSF4-203ENST00000430038 CHRNDQ07001 517 aa21.78■■□□□ 1.08
CPSF4-203ENST00000430038 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
CPSF4-203ENST00000430038 TSKSQ9UJT2 592 aa21.78■■□□□ 1.08
CPSF4-203ENST00000430038 ZNF804BA4D1E1 1349 aa21.78■■□□□ 1.08
CPSF4-203ENST00000430038 TAF5LO75529 589 aa21.77■■□□□ 1.08
CPSF4-203ENST00000430038 DCPSQ96C86 337 aaKnown RBP21.77■■□□□ 1.08
CPSF4-203ENST00000430038 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
CPSF4-203ENST00000430038 ZNF594Q96JF6 807 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-203ENST00000430038 HHIPL1Q96JK4 782 aa21.77■■□□□ 1.08
CPSF4-203ENST00000430038 MYOZ2Q9NPC6 264 aa21.77■■□□□ 1.08
CPSF4-203ENST00000430038 LEMD3Q9Y2U8 911 aa21.77■■□□□ 1.08
CPSF4-203ENST00000430038 USP17L8P0C7I0 530 aa21.76■■□□□ 1.07
CPSF4-203ENST00000430038 ANGEL2Q5VTE6 544 aaKnown RBP21.76■■□□□ 1.07
CPSF4-203ENST00000430038 LMBR1LQ6UX01 489 aa21.76■■□□□ 1.07
CPSF4-203ENST00000430038 FAM155AB1AL88 458 aaPredicted RBP21.75■■□□□ 1.07
CPSF4-203ENST00000430038 MAP2K2P36507 400 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 HUNKP57058 714 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 NBPF9Q3BBW0 867 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 MPHOSPH8Q99549 860 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 COA1Q9GZY4 146 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 CASP8AP2Q9UKL3 1982 aa21.75■■□□□ 1.07
CPSF4-203ENST00000430038 ANKRD18BA2A2Z9 1011 aa21.74■■□□□ 1.07
CPSF4-203ENST00000430038 GRM8O00222 908 aa21.74■■□□□ 1.07
CPSF4-203ENST00000430038 CDCA5Q96FF9 252 aa21.74■■□□□ 1.07
CPSF4-203ENST00000430038 GBA2Q9HCG7 927 aaPredicted RBP21.74■■□□□ 1.07
CPSF4-203ENST00000430038 STRIP1Q5VSL9 837 aa21.73■■□□□ 1.07
CPSF4-203ENST00000430038 PRAMEF18Q5VWM3 479 aa21.73■■□□□ 1.07
CPSF4-203ENST00000430038 SLC4A10Q6U841 1118 aa21.73■■□□□ 1.07
CPSF4-203ENST00000430038 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
CPSF4-203ENST00000430038 ANKRD2Q9GZV1 360 aa21.73■■□□□ 1.07
CPSF4-203ENST00000430038 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-203ENST00000430038 IFIT5Q13325 482 aaKnown RBP21.72■■□□□ 1.07
CPSF4-203ENST00000430038 FBXW7Q969H0 707 aa21.72■■□□□ 1.07
CPSF4-203ENST00000430038 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
CPSF4-203ENST00000430038 CHMP3Q9Y3E7 222 aa21.72■■□□□ 1.07
CPSF4-203ENST00000430038 TTLL5Q6EMB2 1281 aa21.71■■□□□ 1.07
CPSF4-203ENST00000430038 SULF1Q8IWU6 871 aa21.71■■□□□ 1.07
CPSF4-203ENST00000430038 SUCLG2Q96I99 432 aa21.71■■□□□ 1.07
CPSF4-203ENST00000430038 WNT10BO00744 389 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 GTF2IP78347 998 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 RGMBQ6NW40 437 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 MOB2Q70IA6 237 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 CERS5Q8N5B7 392 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 PUS3Q9BZE2 481 aaKnown RBP21.7■■□□□ 1.06
CPSF4-203ENST00000430038 CD209Q9NNX6 404 aa21.7■■□□□ 1.06
CPSF4-203ENST00000430038 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 C2orf69Q8N8R5 385 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 SRCIN1Q9C0H9 1055 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 C9orf78Q9NZ63 289 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-203ENST00000430038 PCDHAC2Q9Y5I4 1007 aa21.69■■□□□ 1.06
CPSF4-203ENST00000430038 BRPF1P55201 1214 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-203ENST00000430038 C15orf52Q6ZUT6 534 aaKnown RBP21.68■■□□□ 1.06
CPSF4-203ENST00000430038 KIAA0825Q8IV33 1275 aa21.68■■□□□ 1.06
CPSF4-203ENST00000430038 UTYO14607 1347 aa21.67■■□□□ 1.06
CPSF4-203ENST00000430038 PLIN1O60240 522 aa21.67■■□□□ 1.06
CPSF4-203ENST00000430038 SASH1O94885 1247 aa21.67■■□□□ 1.06
CPSF4-203ENST00000430038 ZBED3Q96IU2 234 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-203ENST00000430038 PITPNM2Q9BZ72 1349 aa21.66■■□□□ 1.06
CPSF4-203ENST00000430038 KCNJ4P48050 445 aa21.66■■□□□ 1.06
CPSF4-203ENST00000430038 LDHAL6AQ6ZMR3 332 aa21.66■■□□□ 1.06
CPSF4-203ENST00000430038 AOX1Q06278 1338 aa21.65■■□□□ 1.06
CPSF4-203ENST00000430038 ZNF157P51786 506 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-203ENST00000430038 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-203ENST00000430038 NOGQ13253 232 aa21.65■■□□□ 1.06
CPSF4-203ENST00000430038 CCDC57Q2TAC2 916 aa21.65■■□□□ 1.06
CPSF4-203ENST00000430038 BEGAINQ9BUH8 593 aa21.65■■□□□ 1.06
CPSF4-203ENST00000430038 JAG2Q9Y219 1238 aa21.65■■□□□ 1.06
CPSF4-203ENST00000430038 E9PSI1 815 aa21.64■■□□□ 1.05
CPSF4-203ENST00000430038 IL1R1P14778 569 aa21.64■■□□□ 1.05
CPSF4-203ENST00000430038 TRMT2AQ8IZ69 625 aaKnown RBP21.64■■□□□ 1.05
CPSF4-203ENST00000430038 ANKRD44Q8N8A2 993 aa21.64■■□□□ 1.05
CPSF4-203ENST00000430038 BICC1Q9H694 974 aaKnown RBP21.64■■□□□ 1.05
CPSF4-203ENST00000430038 AKAP11Q9UKA4 1901 aa21.64■■□□□ 1.05
CPSF4-203ENST00000430038 MYO3BQ8WXR4 1341 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 SLC10A3P09131 477 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 OGFOD1Q8N543 542 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 CNNM1Q9NRU3 951 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 RIPOR2Q9Y4F9 1068 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 PAPPA2Q9BXP8 1791 aa21.63■■□□□ 1.05
CPSF4-203ENST00000430038 UBE2Q2LH0YL09 131 aa21.62■■□□□ 1.05
CPSF4-203ENST00000430038 RASAL3Q86YV0 1011 aa21.62■■□□□ 1.05
CPSF4-203ENST00000430038 CSRNP1Q96S65 589 aa21.62■■□□□ 1.05
CPSF4-203ENST00000430038 USP44Q9H0E7 712 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms