RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 HMX2A2RU54 273 aa5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 EGFRP00533 1210 aa5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 CD68P34810 354 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 DGKZQ13574 1117 aa5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 COX20Q5RI15 118 aa5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 ASIC4Q96FT7 647 aa5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 RTCBQ9Y3I0 505 aaKnown RBP5.34□□□□□ -1.55
HMGB1P9-201ENST00000429856 XYLBO75191 536 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 BRD2P25440 801 aaKnown RBP5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 ABTB2Q8N961 1025 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 GIMAP7Q8NHV1 300 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 MYRFLQ96LU7 910 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM83CQ9BQN1 747 aa5.33□□□□□ -1.56
HMGB1P9-201ENST00000429856 CARNS1A5YM72 827 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 SART1O43290 800 aaKnown RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 SOX18P35713 384 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 NAA30Q147X3 362 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 OGFOD2Q6N063 350 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 CMTR1Q8N1G2 835 aaKnown RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 SHKBP1Q8TBC3 707 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 HELQQ8TDG4 1101 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM46AQ96IP4 442 aaKnown RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 NSUN5Q96P11 429 aaKnown RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 SAP130Q9H0E3 1048 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 LRFN2Q9ULH4 789 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 ANGEL1Q9UNK9 670 aaKnown RBP5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 TRIM33Q9UPN9 1127 aa5.32□□□□□ -1.56
HMGB1P9-201ENST00000429856 LINC01387J3KSC0 135 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 OPLAHO14841 1288 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 MMP20O60882 483 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 BRD1O95696 1058 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 DUOXA2Q1HG44 320 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 PHLDB3Q6NSJ2 640 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM117BQ6P1L5 589 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 CAPN12Q6ZSI9 719 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM20CQ8IXL6 584 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 POU5F2Q8N7G0 328 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 GALNT11Q8NCW6 608 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 KCNF1Q9H3M0 494 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 STIM2Q9P246 746 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 SEPT3Q9UH03 358 aa5.31□□□□□ -1.56
HMGB1P9-201ENST00000429856 WDR64B1ANS9 1081 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 TNFRSF10BO14763 440 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 C8AP07357 584 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 HOXD8P13378 290 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 SF3B2Q13435 895 aaKnown RBP5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 TREML1Q86YW5 311 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 ABI1Q8IZP0 508 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 KLHL23Q8NBE8 558 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 CCER1Q8TC90 406 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 GTF3C2Q8WUA4 911 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 SPACA7Q96KW9 195 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 TRAIPQ9BWF2 469 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 ATG3Q9NT62 314 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 EGFL7Q9UHF1 273 aa5.3□□□□□ -1.56
HMGB1P9-201ENST00000429856 PATL2C9JE40 543 aaKnown RBP5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 WISP1O95388 367 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 BMP3P12645 472 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 CDC27P30260 824 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 KIAA1211Q6ZU35 1233 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 RGL4Q8IZJ4 473 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 PIM2Q9P1W9 311 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 LEMD3Q9Y2U8 911 aa5.29□□□□□ -1.56
HMGB1P9-201ENST00000429856 FAM177BA6PVY3 158 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 SMNDC1O75940 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 JUNBP17275 347 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 ANKRD34AQ69YU3 496 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 ALKBH2Q6NS38 261 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 TXNDC2Q86VQ3 553 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 ETFBKMTQ8IXQ9 262 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 KCNK4Q9NYG8 393 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 USP20Q9Y2K6 914 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
HMGB1P9-201ENST00000429856 FSCN2O14926 492 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 FAM13AO94988 1023 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 ABL1P00519 1130 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 PDIA4P13667 645 aaKnown RBP5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 NPR3P17342 541 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 SCNN1AP37088 669 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 ZAP70P43403 619 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 FKBP4Q02790 459 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 NOM1Q5C9Z4 860 aaKnown RBP5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 CEP135Q66GS9 1140 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 NLRP13Q86W25 1043 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 PIK3R5Q8WYR1 880 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 LACRTQ9GZZ8 138 aa5.27□□□□□ -1.57
HMGB1P9-201ENST00000429856 RPLP1P05386 114 aaKnown RBP5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 PCSK2P16519 638 aa5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 CDC25BP30305 580 aa5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 KCNA1Q09470 495 aa5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 HYAL2Q12891 473 aa5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 TP53INP2Q8IXH6 220 aa5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 GNEQ9Y223 722 aaKnown RBP5.26□□□□□ -1.57
HMGB1P9-201ENST00000429856 ICMTO60725 284 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms