RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LOC100996750A0A140TA64 210 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 PHACTR2O75167 634 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 TNFRSF21O75509 655 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 NOS3P29474 1203 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 PDE4CQ08493 712 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 TXNDC11Q6PKC3 985 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P5-201ENST00000428894 H3BRB1 525 aa9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 EREGO14944 169 aa9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 PTPRAP18433 802 aa9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 TP53INP1Q96A56 240 aa9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P5-201ENST00000428894 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 DYRK3O43781 588 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 TRPA1O75762 1119 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 ITGB7P26010 798 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 GALNT11Q8NCW6 608 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 ADAM19Q9H013 955 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
HMGB3P5-201ENST00000428894 NFKBIEO00221 500 aa9.43□□□□□ -0.9
HMGB3P5-201ENST00000428894 GJD3Q8N144 294 aa9.43□□□□□ -0.9
HMGB3P5-201ENST00000428894 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P5-201ENST00000428894 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
HMGB3P5-201ENST00000428894 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 ALX3O95076 343 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 EPHA1P21709 976 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 ECM1Q16610 540 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 FAM117BQ6P1L5 589 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 BRPF3Q9ULD4 1205 aa9.42□□□□□ -0.9
HMGB3P5-201ENST00000428894 FSCN2O14926 492 aa9.41□□□□□ -0.9
HMGB3P5-201ENST00000428894 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
HMGB3P5-201ENST00000428894 H2AFB2P0C5Z0 115 aa9.41□□□□□ -0.9
HMGB3P5-201ENST00000428894 MEGF10Q96KG7 1140 aa9.41□□□□□ -0.9
HMGB3P5-201ENST00000428894 OSMRQ99650 979 aa9.41□□□□□ -0.9
HMGB3P5-201ENST00000428894 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P5-201ENST00000428894 EDN3P14138 238 aa9.4□□□□□ -0.9
HMGB3P5-201ENST00000428894 CD68P34810 354 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P5-201ENST00000428894 ZFYVE28Q9HCC9 887 aa9.4□□□□□ -0.9
HMGB3P5-201ENST00000428894 AMOTL2Q9Y2J4 779 aa9.4□□□□□ -0.9
HMGB3P5-201ENST00000428894 CABP4P57796 275 aa9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 TMEM102Q8N9M5 508 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 KLHL23Q8NBE8 558 aa9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 NXPE3Q969Y0 559 aa9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
HMGB3P5-201ENST00000428894 H3BRJ5 948 aa9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 KLHDC7BQ96G42 594 aa9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 SEC31BQ9NQW1 1179 aa9.38□□□□□ -0.91
HMGB3P5-201ENST00000428894 ABCC9O60706 1549 aa9.37□□□□□ -0.91
HMGB3P5-201ENST00000428894 TM4SF5O14894 197 aa9.37□□□□□ -0.91
HMGB3P5-201ENST00000428894 NDUFB5O43674 189 aa9.37□□□□□ -0.91
HMGB3P5-201ENST00000428894 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P5-201ENST00000428894 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.37□□□□□ -0.91
HMGB3P5-201ENST00000428894 DDX3YO15523 660 aaKnown RBP9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 WISP1O95388 367 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 PRSS36Q5K4E3 855 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 ACAD11Q709F0 780 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 WNT8BQ93098 351 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 SOX13Q9UN79 622 aa9.36□□□□□ -0.91
HMGB3P5-201ENST00000428894 GLB1P16278 677 aa9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 PEAR1Q5VY43 1037 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 BSNDQ8WZ55 320 aa9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 OSGEPQ9NPF4 335 aa9.35□□□□□ -0.91
HMGB3P5-201ENST00000428894 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
HMGB3P5-201ENST00000428894 ASAP3Q8TDY4 903 aa9.34□□□□□ -0.91
HMGB3P5-201ENST00000428894 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
HMGB3P5-201ENST00000428894 ADAM11O75078 769 aa9.33□□□□□ -0.92
HMGB3P5-201ENST00000428894 NEFLP07196 543 aa9.33□□□□□ -0.92
HMGB3P5-201ENST00000428894 ARL4DP49703 201 aa9.33□□□□□ -0.92
HMGB3P5-201ENST00000428894 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
HMGB3P5-201ENST00000428894 Q6ZS46 218 aa9.33□□□□□ -0.92
HMGB3P5-201ENST00000428894 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 KIAA1211Q6ZU35 1233 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 VN1R5Q7Z5H4 357 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 GALNT12Q8IXK2 581 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 TMC1Q8TDI8 760 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 UBASH3BQ8TF42 649 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 CITED4Q96RK1 184 aa9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 BHLHE41Q9C0J9 482 aaPredicted RBP9.32□□□□□ -0.92
HMGB3P5-201ENST00000428894 SOX1O00570 391 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms