RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 NKAPLQ5M9Q1 402 aa8.4□□□□□ -1.06
LINC00348-201ENST00000428761 ILDR2Q71H61 639 aa8.4□□□□□ -1.06
LINC00348-201ENST00000428761 OR13H1Q8NG92 308 aa8.4□□□□□ -1.06
LINC00348-201ENST00000428761 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
LINC00348-201ENST00000428761 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
LINC00348-201ENST00000428761 JPH1Q9HDC5 661 aaPredicted RBP8.4□□□□□ -1.06
LINC00348-201ENST00000428761 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
LINC00348-201ENST00000428761 RGS9O75916 674 aaPredicted RBP8.39□□□□□ -1.07
LINC00348-201ENST00000428761 GRIK5Q16478 980 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 NAALADL2Q58DX5 795 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
LINC00348-201ENST00000428761 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 POLIQ9UNA4 740 aa8.39□□□□□ -1.07
LINC00348-201ENST00000428761 FZD6O60353 706 aa8.38□□□□□ -1.07
LINC00348-201ENST00000428761 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
LINC00348-201ENST00000428761 HDLBPQ00341 1268 aaKnown RBP8.38□□□□□ -1.07
LINC00348-201ENST00000428761 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
LINC00348-201ENST00000428761 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
LINC00348-201ENST00000428761 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
LINC00348-201ENST00000428761 TTC9Q92623 222 aa8.38□□□□□ -1.07
LINC00348-201ENST00000428761 NSUN5Q96P11 429 aaKnown RBP8.38□□□□□ -1.07
LINC00348-201ENST00000428761 TMEM63CQ9P1W3 806 aa8.38□□□□□ -1.07
LINC00348-201ENST00000428761 A6NHS1 94 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
LINC00348-201ENST00000428761 AAMPQ13685 434 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 GRIK4Q16099 956 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
LINC00348-201ENST00000428761 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
LINC00348-201ENST00000428761 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
LINC00348-201ENST00000428761 FAM129BQ96TA1 746 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 CCDC87Q9NVE4 849 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
LINC00348-201ENST00000428761 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
LINC00348-201ENST00000428761 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 DYRK3O43781 588 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 CYP2E1P05181 493 aaPredicted RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 HSP90B1P14625 803 aaKnown RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 PCSK2P16519 638 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 EHHADHQ08426 723 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 SF3A1Q15459 793 aaKnown RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 ZNF438Q7Z4V0 828 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 SMG9Q9H0W8 520 aaKnown RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 CDK11AQ9UQ88 783 aaPredicted RBP8.36□□□□□ -1.07
LINC00348-201ENST00000428761 CUX2O14529 1486 aa8.36□□□□□ -1.07
LINC00348-201ENST00000428761 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
LINC00348-201ENST00000428761 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
LINC00348-201ENST00000428761 ITGAEP38570 1179 aa8.35□□□□□ -1.07
LINC00348-201ENST00000428761 TRAPPC3LQ5T215 181 aa8.35□□□□□ -1.07
LINC00348-201ENST00000428761 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
LINC00348-201ENST00000428761 FAM177A1Q8N128 213 aaPredicted RBP8.35□□□□□ -1.07
LINC00348-201ENST00000428761 UBXN4Q92575 508 aa8.35□□□□□ -1.07
LINC00348-201ENST00000428761 PARP2Q9UGN5 583 aa8.35□□□□□ -1.07
LINC00348-201ENST00000428761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
LINC00348-201ENST00000428761 XPCQ01831 940 aaPredicted RBP8.34□□□□□ -1.07
LINC00348-201ENST00000428761 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
LINC00348-201ENST00000428761 DMRTC2Q8IXT2 367 aaPredicted RBP8.34□□□□□ -1.07
LINC00348-201ENST00000428761 C1orf127Q8N9H9 656 aa8.34□□□□□ -1.07
LINC00348-201ENST00000428761 PLD4Q96BZ4 506 aa8.34□□□□□ -1.07
LINC00348-201ENST00000428761 GHRHP01286 108 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 DAB2P98082 770 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 RAD51AP2Q09MP3 1159 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 HYAL2Q12891 473 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 PRSS36Q5K4E3 855 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 MSL1Q68DK7 614 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
LINC00348-201ENST00000428761 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
LINC00348-201ENST00000428761 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
LINC00348-201ENST00000428761 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 KRTAP9-6A0A140TA67 174 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 GPR182O15218 404 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 KIF4AO95239 1232 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 USP5P45974 858 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 GJD3Q8N144 294 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
LINC00348-201ENST00000428761 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
LINC00348-201ENST00000428761 MAPK8P45983 427 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 ARTNQ5T4W7 220 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 CEP120Q8N960 986 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 TMEM87AQ8NBN3 555 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 CHRDQ9H2X0 955 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 SALL4Q9UJQ4 1053 aa8.31□□□□□ -1.08
LINC00348-201ENST00000428761 C9orf172C9J069 976 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 SORBS3O60504 671 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 ATP11AP98196 1134 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 ENOX2Q16206 610 aaKnown RBP8.3□□□□□ -1.08
LINC00348-201ENST00000428761 C9orf131Q5VYM1 1079 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 FAM161BQ96MY7 647 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 RBSNQ9H1K0 784 aa8.3□□□□□ -1.08
LINC00348-201ENST00000428761 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms