RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 C8orf58Q8NAV2 365 aa21.79■■□□□ 1.08
PSMD4-203ENST00000427779 MMP14P50281 582 aa21.78■■□□□ 1.08
PSMD4-203ENST00000427779 TTLL12Q14166 644 aaPredicted RBP21.78■■□□□ 1.08
PSMD4-203ENST00000427779 PKN2Q16513 984 aaKnown RBP21.78■■□□□ 1.08
PSMD4-203ENST00000427779 KSR2Q6VAB6 950 aa21.78■■□□□ 1.08
PSMD4-203ENST00000427779 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
PSMD4-203ENST00000427779 HDAC9Q9UKV0 1011 aa21.78■■□□□ 1.08
PSMD4-203ENST00000427779 CCT4P50991 539 aaKnown RBP21.77■■□□□ 1.08
PSMD4-203ENST00000427779 NBPF9Q3BBW0 867 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 STRIP1Q5VSL9 837 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 FBXW7Q969H0 707 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 COA1Q9GZY4 146 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 PCDH10Q9P2E7 1040 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
PSMD4-203ENST00000427779 PI4KAP2A4QPH2 592 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 UBE2Q2LH0YL09 131 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 DACT2Q5SW24 774 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 MOB2Q70IA6 237 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 PI4KAP1Q8N8J0 262 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 GREM2Q9H772 168 aa21.76■■□□□ 1.07
PSMD4-203ENST00000427779 SCAF8Q9UPN6 1271 aaKnown RBP21.76■■□□□ 1.07
PSMD4-203ENST00000427779 WNT10BO00744 389 aa21.75■■□□□ 1.07
PSMD4-203ENST00000427779 IGKV5-2P06315 115 aa21.75■■□□□ 1.07
PSMD4-203ENST00000427779 STK31Q9BXU1 1019 aa21.75■■□□□ 1.07
PSMD4-203ENST00000427779 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
PSMD4-203ENST00000427779 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
PSMD4-203ENST00000427779 IGHMBP2P38935 993 aaKnown RBP21.74■■□□□ 1.07
PSMD4-203ENST00000427779 PRAMEF18Q5VWM3 479 aa21.74■■□□□ 1.07
PSMD4-203ENST00000427779 ZNF296Q8WUU4 475 aaPredicted RBP21.74■■□□□ 1.07
PSMD4-203ENST00000427779 HPS5Q9UPZ3 1129 aa21.74■■□□□ 1.07
PSMD4-203ENST00000427779 WTIPA6NIX2 430 aaPredicted RBP21.73■■□□□ 1.07
PSMD4-203ENST00000427779 TM4SF4P48230 202 aa21.73■■□□□ 1.07
PSMD4-203ENST00000427779 SREBF2Q12772 1141 aa21.73■■□□□ 1.07
PSMD4-203ENST00000427779 NOM1Q5C9Z4 860 aaKnown RBP21.73■■□□□ 1.07
PSMD4-203ENST00000427779 MXD3Q9BW11 206 aa21.73■■□□□ 1.07
PSMD4-203ENST00000427779 TBC1D8O95759 1140 aa21.72■■□□□ 1.07
PSMD4-203ENST00000427779 ARMC9Q7Z3E5 817 aa21.72■■□□□ 1.07
PSMD4-203ENST00000427779 APOBEC3FQ8IUX4 373 aaKnown RBP21.72■■□□□ 1.07
PSMD4-203ENST00000427779 NEURL1BA8MQ27 555 aa21.71■■□□□ 1.07
PSMD4-203ENST00000427779 CWF19L2Q2TBE0 894 aaKnown RBP21.71■■□□□ 1.07
PSMD4-203ENST00000427779 TSPYL6Q8N831 410 aa21.71■■□□□ 1.07
PSMD4-203ENST00000427779 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
PSMD4-203ENST00000427779 GPR25O00155 361 aa21.7■■□□□ 1.06
PSMD4-203ENST00000427779 SASH1O94885 1247 aa21.7■■□□□ 1.06
PSMD4-203ENST00000427779 PRPF38BQ5VTL8 546 aaKnown RBP21.7■■□□□ 1.06
PSMD4-203ENST00000427779 TTLL5Q6EMB2 1281 aa21.7■■□□□ 1.06
PSMD4-203ENST00000427779 UBE3BQ7Z3V4 1068 aa21.7■■□□□ 1.06
PSMD4-203ENST00000427779 ZNF804BA4D1E1 1349 aa21.7■■□□□ 1.06
PSMD4-203ENST00000427779 COL1A1P02452 1464 aaPredicted RBP21.7■■□□□ 1.06
PSMD4-203ENST00000427779 H7C1W4 665 aa21.69■■□□□ 1.06
PSMD4-203ENST00000427779 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
PSMD4-203ENST00000427779 ITGA6P23229 1130 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 MKRN3Q13064 507 aaKnown RBP21.68■■□□□ 1.06
PSMD4-203ENST00000427779 TXNRD3Q86VQ6 643 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 KIAA0825Q8IV33 1275 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 PLA2G12BQ9BX93 195 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 CFHR5Q9BXR6 569 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 ECM29Q5VYK3 1845 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 CACNA1FO60840 1977 aa21.68■■□□□ 1.06
PSMD4-203ENST00000427779 KCNJ4P48050 445 aa21.67■■□□□ 1.06
PSMD4-203ENST00000427779 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
PSMD4-203ENST00000427779 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
PSMD4-203ENST00000427779 TSR2Q969E8 191 aaKnown RBP21.67■■□□□ 1.06
PSMD4-203ENST00000427779 FKTNO75072 461 aa21.66■■□□□ 1.06
PSMD4-203ENST00000427779 ALDH1A1P00352 501 aa21.66■■□□□ 1.06
PSMD4-203ENST00000427779 GTF2IP78347 998 aa21.66■■□□□ 1.06
PSMD4-203ENST00000427779 PRKG1Q13976 671 aa21.66■■□□□ 1.06
PSMD4-203ENST00000427779 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
PSMD4-203ENST00000427779 MYH16Q9H6N6 1097 aa21.66■■□□□ 1.06
PSMD4-203ENST00000427779 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
PSMD4-203ENST00000427779 GCKRQ14397 625 aa21.65■■□□□ 1.06
PSMD4-203ENST00000427779 ZBED3Q96IU2 234 aaPredicted RBP21.65■■□□□ 1.06
PSMD4-203ENST00000427779 ANGEL1Q9UNK9 670 aaKnown RBP21.65■■□□□ 1.06
PSMD4-203ENST00000427779 LDLRAD1Q5T700 205 aa21.64■■□□□ 1.05
PSMD4-203ENST00000427779 SPRYD7Q5W111 196 aa21.64■■□□□ 1.05
PSMD4-203ENST00000427779 CSF1RP07333 972 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 KLRK1P26718 216 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 INHBEP58166 350 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 CHRNDQ07001 517 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 DLGAP5Q15398 846 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 CCDC27Q2M243 656 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 G2E3Q7L622 706 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 CD209Q9NNX6 404 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 PPP2R3BQ9Y5P8 575 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 LAMB1P07942 1786 aa21.63■■□□□ 1.05
PSMD4-203ENST00000427779 A0A1B0GUL6 1792 aa21.62■■□□□ 1.05
PSMD4-203ENST00000427779 ANKRD18BA2A2Z9 1011 aa21.62■■□□□ 1.05
PSMD4-203ENST00000427779 MANSC4A6NHS7 340 aaPredicted RBP21.62■■□□□ 1.05
PSMD4-203ENST00000427779 FLIIQ13045 1269 aa21.62■■□□□ 1.05
PSMD4-203ENST00000427779 DEFB129Q9H1M3 183 aa21.62■■□□□ 1.05
PSMD4-203ENST00000427779 MYO1BO43795 1136 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 PPP1R12BO60237 982 aaPredicted RBP21.61■■□□□ 1.05
PSMD4-203ENST00000427779 ZBTB48P10074 688 aaPredicted RBP21.61■■□□□ 1.05
PSMD4-203ENST00000427779 CASP7P55210 303 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 FKBP5Q13451 457 aaPredicted RBP21.61■■□□□ 1.05
PSMD4-203ENST00000427779 MAP3K11Q16584 847 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 MTMR14Q8NCE2 650 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 LINS1Q8NG48 757 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 DNAAF4Q8WXU2 420 aa21.61■■□□□ 1.05
PSMD4-203ENST00000427779 SLC10A4Q96EP9 437 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms