RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 CCDC191Q8NCU4 936 aa17.58■□□□□ 0.4
VEGFB-202ENST00000426086 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
VEGFB-202ENST00000426086 RALBP1Q15311 655 aa17.57■□□□□ 0.4
VEGFB-202ENST00000426086 MINPP1Q9UNW1 487 aa17.57■□□□□ 0.4
VEGFB-202ENST00000426086 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
VEGFB-202ENST00000426086 MED23Q9ULK4 1368 aa17.56■□□□□ 0.4
VEGFB-202ENST00000426086 NOM1Q5C9Z4 860 aaKnown RBP17.56■□□□□ 0.4
VEGFB-202ENST00000426086 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
VEGFB-202ENST00000426086 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
VEGFB-202ENST00000426086 KLRK1P26718 216 aa17.55■□□□□ 0.4
VEGFB-202ENST00000426086 CTSWP56202 376 aa17.55■□□□□ 0.4
VEGFB-202ENST00000426086 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
VEGFB-202ENST00000426086 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
VEGFB-202ENST00000426086 GREM2Q9H772 168 aa17.55■□□□□ 0.4
VEGFB-202ENST00000426086 FKTNO75072 461 aa17.54■□□□□ 0.4
VEGFB-202ENST00000426086 IGKV5-2P06315 115 aa17.54■□□□□ 0.4
VEGFB-202ENST00000426086 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
VEGFB-202ENST00000426086 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
VEGFB-202ENST00000426086 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
VEGFB-202ENST00000426086 POTEFA5A3E0 1075 aa17.53■□□□□ 0.4
VEGFB-202ENST00000426086 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
VEGFB-202ENST00000426086 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
VEGFB-202ENST00000426086 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
VEGFB-202ENST00000426086 SPRYD7Q5W111 196 aa17.53■□□□□ 0.4
VEGFB-202ENST00000426086 ZBED3Q96IU2 234 aaPredicted RBP17.53■□□□□ 0.4
VEGFB-202ENST00000426086 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
VEGFB-202ENST00000426086 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
VEGFB-202ENST00000426086 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
VEGFB-202ENST00000426086 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
VEGFB-202ENST00000426086 KIAA0825Q8IV33 1275 aa17.52■□□□□ 0.4
VEGFB-202ENST00000426086 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
VEGFB-202ENST00000426086 CDC5LQ99459 802 aaKnown RBP17.52■□□□□ 0.4
VEGFB-202ENST00000426086 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
VEGFB-202ENST00000426086 ANGEL1Q9UNK9 670 aaKnown RBP17.52■□□□□ 0.4
VEGFB-202ENST00000426086 PCDHAC2Q9Y5I4 1007 aa17.52■□□□□ 0.4
VEGFB-202ENST00000426086 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
VEGFB-202ENST00000426086 NF2P35240 595 aa17.51■□□□□ 0.39
VEGFB-202ENST00000426086 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
VEGFB-202ENST00000426086 CAP1Q01518 475 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
VEGFB-202ENST00000426086 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
VEGFB-202ENST00000426086 ARMC9Q7Z3E5 817 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 CLMNQ96JQ2 1002 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 TRIM17Q9Y577 477 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 MYH3P11055 1940 aa17.5■□□□□ 0.39
VEGFB-202ENST00000426086 MYO3BQ8WXR4 1341 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 SNAP23O00161 211 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
VEGFB-202ENST00000426086 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 OTOP1Q7RTM1 612 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 IFNL1Q8IU54 200 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
VEGFB-202ENST00000426086 AOX1Q06278 1338 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 APAF1O14727 1248 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 GTF2IP78347 998 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 HABP4Q5JVS0 413 aaKnown RBP17.48■□□□□ 0.39
VEGFB-202ENST00000426086 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
VEGFB-202ENST00000426086 CERS5Q8N5B7 392 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
VEGFB-202ENST00000426086 KSR2Q6VAB6 950 aa17.47■□□□□ 0.39
VEGFB-202ENST00000426086 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
VEGFB-202ENST00000426086 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
VEGFB-202ENST00000426086 LAMB1P07942 1786 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
VEGFB-202ENST00000426086 GJA5P36382 358 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 GNAI1P63096 354 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 G2E3Q7L622 706 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 WNK4Q96J92 1243 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
VEGFB-202ENST00000426086 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.38
VEGFB-202ENST00000426086 MANSC4A6NHS7 340 aaPredicted RBP17.45■□□□□ 0.38
VEGFB-202ENST00000426086 H7C1W4 665 aa17.45■□□□□ 0.38
VEGFB-202ENST00000426086 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
VEGFB-202ENST00000426086 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
VEGFB-202ENST00000426086 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
VEGFB-202ENST00000426086 SLC10A4Q96EP9 437 aa17.45■□□□□ 0.38
VEGFB-202ENST00000426086 ALDH1A1P00352 501 aa17.44■□□□□ 0.38
VEGFB-202ENST00000426086 ITGA6P23229 1130 aa17.44■□□□□ 0.38
VEGFB-202ENST00000426086 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
VEGFB-202ENST00000426086 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
VEGFB-202ENST00000426086 CLRN2A0PK11 232 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
VEGFB-202ENST00000426086 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
VEGFB-202ENST00000426086 CASP7P55210 303 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 CHRNDQ07001 517 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 CRHR2Q13324 411 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 DLGAP5Q15398 846 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
VEGFB-202ENST00000426086 PTPN18Q99952 460 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 PTPN22Q9Y2R2 807 aa17.43■□□□□ 0.38
VEGFB-202ENST00000426086 COL1A1P02452 1464 aaPredicted RBP17.43■□□□□ 0.38
VEGFB-202ENST00000426086 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
VEGFB-202ENST00000426086 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
VEGFB-202ENST00000426086 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
VEGFB-202ENST00000426086 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms