RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
ACTB-204ENST00000425660 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
ACTB-204ENST00000425660 NPHP1O15259 732 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
ACTB-204ENST00000425660 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
ACTB-204ENST00000425660 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 FLAD1Q8NFF5 587 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 A0A1B0GUL6 1792 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 SNAP23O00161 211 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 SERPINB2P05120 415 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 NEK4P51957 841 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
ACTB-204ENST00000425660 RBM8AQ9Y5S9 174 aaKnown RBP18.28■□□□□ 0.52
ACTB-204ENST00000425660 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
ACTB-204ENST00000425660 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
ACTB-204ENST00000425660 MCM2P49736 904 aa18.27■□□□□ 0.52
ACTB-204ENST00000425660 EN1Q05925 392 aaPredicted RBP18.27■□□□□ 0.52
ACTB-204ENST00000425660 DDR1Q08345 913 aa18.27■□□□□ 0.52
ACTB-204ENST00000425660 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
ACTB-204ENST00000425660 ZNF804BA4D1E1 1349 aa18.27■□□□□ 0.51
ACTB-204ENST00000425660 DDIT3P35638 169 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
ACTB-204ENST00000425660 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 TAF1P21675 1872 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 ST5P78524 1137 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
ACTB-204ENST00000425660 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
ACTB-204ENST00000425660 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
ACTB-204ENST00000425660 KLRG2A4D1S0 409 aaPredicted RBP18.25■□□□□ 0.51
ACTB-204ENST00000425660 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
ACTB-204ENST00000425660 GRAPQ13588 217 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 TSGA10IPQ3SY00 556 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 CREB3L3Q68CJ9 461 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
ACTB-204ENST00000425660 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.518e-19■□□□□ 10.2
ACTB-204ENST00000425660 ANKRD2Q9GZV1 360 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 MAST3O60307 1309 aa18.25■□□□□ 0.51
ACTB-204ENST00000425660 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
ACTB-204ENST00000425660 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
ACTB-204ENST00000425660 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
ACTB-204ENST00000425660 SLC27A2O14975 620 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 ZBTB22O15209 634 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 BCAMP50895 628 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 APPBP2Q92624 585 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 KCNJ4P48050 445 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 ANP32EQ9BTT0 268 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
ACTB-204ENST00000425660 PIH1D3Q9NQM4 214 aaKnown RBP18.23■□□□□ 0.51
ACTB-204ENST00000425660 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
ACTB-204ENST00000425660 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
ACTB-204ENST00000425660 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
ACTB-204ENST00000425660 ADD2P35612 726 aa18.22■□□□□ 0.51
ACTB-204ENST00000425660 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
ACTB-204ENST00000425660 TTC14Q96N46 770 aa18.22■□□□□ 0.51
ACTB-204ENST00000425660 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
ACTB-204ENST00000425660 NRXN2Q9P2S2 1712 aa18.22■□□□□ 0.51
ACTB-204ENST00000425660 HOXA10P31260 410 aaPredicted RBP18.21■□□□□ 0.51
ACTB-204ENST00000425660 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.51
ACTB-204ENST00000425660 M0R2C6 588 aa18.21■□□□□ 0.51
ACTB-204ENST00000425660 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
ACTB-204ENST00000425660 CAVIN4Q5BKX8 364 aa18.21■□□□□ 0.51
ACTB-204ENST00000425660 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
ACTB-204ENST00000425660 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 CHMP5Q9NZZ3 219 aa18.2■□□□□ 0.5
ACTB-204ENST00000425660 CIZ1Q9ULV3 898 aaPredicted RBP18.2■□□□□ 0.5
ACTB-204ENST00000425660 TCRBV5S4A2TA0A5A2 114 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 VPS53Q5VIR6 699 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.52e-12■■■□□ 16.7
ACTB-204ENST00000425660 PUS7LQ9H0K6 701 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 GNL3LQ9NVN8 582 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 IRS2Q9Y4H2 1338 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 MYH7P12883 1935 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 SEMA3EO15041 775 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 HSP90AA1P07900 732 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 PSMA5P28066 241 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 GYG1P46976 350 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
ACTB-204ENST00000425660 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
ACTB-204ENST00000425660 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
ACTB-204ENST00000425660 PDE6AP16499 860 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms