RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 PDE4DIPQ5VU43 2346 aa19.53■□□□□ 0.72
HDAC11-210ENST00000425430 USP17L3A6NCW0 530 aa19.52■□□□□ 0.72
HDAC11-210ENST00000425430 USP17L4A6NCW7 530 aa19.52■□□□□ 0.72
HDAC11-210ENST00000425430 USP17L1Q7RTZ2 530 aa19.52■□□□□ 0.72
HDAC11-210ENST00000425430 CTU1Q7Z7A3 348 aaKnown RBP19.52■□□□□ 0.72
HDAC11-210ENST00000425430 ATP2B4P23634 1241 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 FKBP1BP68106 108 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 MOB2Q70IA6 237 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 FBXW7Q969H0 707 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 CACNA1FO60840 1977 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
HDAC11-210ENST00000425430 DDX58O95786 925 aaKnown RBP19.5■□□□□ 0.71
HDAC11-210ENST00000425430 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
HDAC11-210ENST00000425430 TTLL12Q14166 644 aaPredicted RBP19.5■□□□□ 0.71
HDAC11-210ENST00000425430 REM2Q8IYK8 340 aaPredicted RBP19.5■□□□□ 0.71
HDAC11-210ENST00000425430 GMLQ99445 158 aa19.5■□□□□ 0.71
HDAC11-210ENST00000425430 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
HDAC11-210ENST00000425430 MYH3P11055 1940 aa19.5■□□□□ 0.71
HDAC11-210ENST00000425430 PI4KAP2A4QPH2 592 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 CTSWP56202 376 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 PRAMEF18Q5VWM3 479 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 PODNQ7Z5L7 613 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 MIER1Q8N108 512 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 PI4KAP1Q8N8J0 262 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
HDAC11-210ENST00000425430 METTL22Q9BUU2 404 aaPredicted RBP19.49■□□□□ 0.71
HDAC11-210ENST00000425430 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
HDAC11-210ENST00000425430 MED23Q9ULK4 1368 aa19.48■□□□□ 0.71
HDAC11-210ENST00000425430 UBE2Q2LH0YL09 131 aa19.48■□□□□ 0.71
HDAC11-210ENST00000425430 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
HDAC11-210ENST00000425430 ZNF646O15015 1829 aaPredicted RBP19.47■□□□□ 0.71
HDAC11-210ENST00000425430 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
HDAC11-210ENST00000425430 NBPF9Q3BBW0 867 aa19.47■□□□□ 0.71
HDAC11-210ENST00000425430 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
HDAC11-210ENST00000425430 KSR2Q6VAB6 950 aa19.47■□□□□ 0.71
HDAC11-210ENST00000425430 MXD3Q9BW11 206 aa19.47■□□□□ 0.71
HDAC11-210ENST00000425430 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
HDAC11-210ENST00000425430 WTIPA6NIX2 430 aaPredicted RBP19.46■□□□□ 0.71
HDAC11-210ENST00000425430 TBC1D8O95759 1140 aa19.46■□□□□ 0.71
HDAC11-210ENST00000425430 FLIIQ13045 1269 aa19.46■□□□□ 0.71
HDAC11-210ENST00000425430 MKRN3Q13064 507 aaKnown RBP19.46■□□□□ 0.71
HDAC11-210ENST00000425430 OGFOD1Q8N543 542 aa19.46■□□□□ 0.71
HDAC11-210ENST00000425430 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
HDAC11-210ENST00000425430 HPS5Q9UPZ3 1129 aa19.46■□□□□ 0.71
HDAC11-210ENST00000425430 SASH1O94885 1247 aa19.45■□□□□ 0.7
HDAC11-210ENST00000425430 NF2P35240 595 aa19.45■□□□□ 0.7
HDAC11-210ENST00000425430 CWF19L2Q2TBE0 894 aaKnown RBP19.45■□□□□ 0.7
HDAC11-210ENST00000425430 ZNF296Q8WUU4 475 aaPredicted RBP19.45■□□□□ 0.7
HDAC11-210ENST00000425430 GREM2Q9H772 168 aa19.45■□□□□ 0.7
HDAC11-210ENST00000425430 CCT4P50991 539 aaKnown RBP19.44■□□□□ 0.7
HDAC11-210ENST00000425430 DACT2Q5SW24 774 aa19.44■□□□□ 0.7
HDAC11-210ENST00000425430 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
HDAC11-210ENST00000425430 MINPP1Q9UNW1 487 aa19.44■□□□□ 0.7
HDAC11-210ENST00000425430 WNT10BO00744 389 aa19.43■□□□□ 0.7
HDAC11-210ENST00000425430 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
HDAC11-210ENST00000425430 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
HDAC11-210ENST00000425430 BSDC1Q9NW68 430 aaPredicted RBP19.43■□□□□ 0.7
HDAC11-210ENST00000425430 MYO3BQ8WXR4 1341 aa19.43■□□□□ 0.7
HDAC11-210ENST00000425430 NEXNQ0ZGT2 675 aa19.42■□□□□ 0.7
HDAC11-210ENST00000425430 PRKG1Q13976 671 aa19.42■□□□□ 0.7
HDAC11-210ENST00000425430 PKN2Q16513 984 aaKnown RBP19.42■□□□□ 0.7
HDAC11-210ENST00000425430 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
HDAC11-210ENST00000425430 F6X3S4 739 aa19.41■□□□□ 0.7
HDAC11-210ENST00000425430 IGHMBP2P38935 993 aaKnown RBP19.41■□□□□ 0.7
HDAC11-210ENST00000425430 FKBP5Q13451 457 aaPredicted RBP19.41■□□□□ 0.7
HDAC11-210ENST00000425430 STRIP1Q5VSL9 837 aa19.41■□□□□ 0.7
HDAC11-210ENST00000425430 COA1Q9GZY4 146 aa19.41■□□□□ 0.7
HDAC11-210ENST00000425430 PCDH10Q9P2E7 1040 aa19.41■□□□□ 0.7
HDAC11-210ENST00000425430 SREBF2Q12772 1141 aa19.4■□□□□ 0.7
HDAC11-210ENST00000425430 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
HDAC11-210ENST00000425430 UBE3BQ7Z3V4 1068 aa19.4■□□□□ 0.7
HDAC11-210ENST00000425430 TXNRD3Q86VQ6 643 aa19.4■□□□□ 0.7
HDAC11-210ENST00000425430 KIAA0825Q8IV33 1275 aa19.4■□□□□ 0.7
HDAC11-210ENST00000425430 E9PSI1 815 aa19.39■□□□□ 0.69
HDAC11-210ENST00000425430 GPR25O00155 361 aa19.39■□□□□ 0.69
HDAC11-210ENST00000425430 KLRK1P26718 216 aa19.39■□□□□ 0.69
HDAC11-210ENST00000425430 ARMC9Q7Z3E5 817 aa19.39■□□□□ 0.69
HDAC11-210ENST00000425430 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
HDAC11-210ENST00000425430 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
HDAC11-210ENST00000425430 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.39■□□□□ 0.69
HDAC11-210ENST00000425430 ZNF804BA4D1E1 1349 aa19.38■□□□□ 0.69
HDAC11-210ENST00000425430 TM4SF4P48230 202 aa19.38■□□□□ 0.69
HDAC11-210ENST00000425430 PTPN12Q05209 780 aaKnown RBP19.38■□□□□ 0.69
HDAC11-210ENST00000425430 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
HDAC11-210ENST00000425430 LEMD3Q9Y2U8 911 aa19.38■□□□□ 0.69
HDAC11-210ENST00000425430 KCNJ4P48050 445 aa19.37■□□□□ 0.69
HDAC11-210ENST00000425430 CASP7P55210 303 aa19.37■□□□□ 0.69
HDAC11-210ENST00000425430 TTLL5Q6EMB2 1281 aa19.37■□□□□ 0.69
HDAC11-210ENST00000425430 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
HDAC11-210ENST00000425430 H7C1W4 665 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 FKTNO75072 461 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 ITGA6P23229 1130 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 GTF2IP78347 998 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 GCKRQ14397 625 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 FBXO46Q6PJ61 603 aaPredicted RBP19.36■□□□□ 0.69
HDAC11-210ENST00000425430 MPHOSPH8Q99549 860 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
HDAC11-210ENST00000425430 NOM1Q5C9Z4 860 aaKnown RBP19.35■□□□□ 0.69
HDAC11-210ENST00000425430 MRPL50Q8N5N7 158 aaKnown RBP19.35■□□□□ 0.69
HDAC11-210ENST00000425430 FZD1Q9UP38 647 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms