RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
SFXN1-202ENST00000421887 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 MUC3BQ9H195 1237 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
SFXN1-202ENST00000421887 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 PRR19A6NJB7 356 aa8.81□□□□□ -1
SFXN1-202ENST00000421887 OPLAHO14841 1288 aa8.81□□□□□ -1
SFXN1-202ENST00000421887 CDC25BP30305 580 aa8.81□□□□□ -1
SFXN1-202ENST00000421887 VTI1AQ96AJ9 217 aa8.81□□□□□ -1
SFXN1-202ENST00000421887 EGFRP00533 1210 aa8.8□□□□□ -1
SFXN1-202ENST00000421887 CD68P34810 354 aaPredicted RBP8.8□□□□□ -1
SFXN1-202ENST00000421887 DPYDQ12882 1025 aa8.8□□□□□ -1
SFXN1-202ENST00000421887 ADGRE2Q9UHX3 823 aa8.8□□□□□ -1
SFXN1-202ENST00000421887 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
SFXN1-202ENST00000421887 UVSSAQ2YD98 709 aa8.79□□□□□ -1
SFXN1-202ENST00000421887 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
SFXN1-202ENST00000421887 LACRTQ9GZZ8 138 aa8.79□□□□□ -1
SFXN1-202ENST00000421887 KCNK4Q9NYG8 393 aa8.79□□□□□ -1
SFXN1-202ENST00000421887 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
SFXN1-202ENST00000421887 CACTIN-AS1Q8N1I8 211 aa8.78□□□□□ -1
SFXN1-202ENST00000421887 KCNF1Q9H3M0 494 aa8.78□□□□□ -1
SFXN1-202ENST00000421887 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
SFXN1-202ENST00000421887 TOP2BQ02880 1626 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 SOX18P35713 384 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 TREML1Q86YW5 311 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 FAM46AQ96IP4 442 aaKnown RBP8.77□□□□□ -1.01
SFXN1-202ENST00000421887 MYRFLQ96LU7 910 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
SFXN1-202ENST00000421887 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
SFXN1-202ENST00000421887 DUOXA2Q1HG44 320 aa8.76□□□□□ -1.01
SFXN1-202ENST00000421887 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
SFXN1-202ENST00000421887 RUSC2Q8N2Y8 1516 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 JAG1P78504 1218 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 CEP135Q66GS9 1140 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 KIAA1211Q6ZU35 1233 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 KCNMB2Q9Y691 235 aa8.75□□□□□ -1.01
SFXN1-202ENST00000421887 WDR64B1ANS9 1081 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 BMP3P12645 472 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 PTK7Q13308 1070 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 OGFOD2Q6N063 350 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 FAM20CQ8IXL6 584 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 ABI1Q8IZP0 508 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 MYO19Q96H55 970 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 FAM83CQ9BQN1 747 aa8.74□□□□□ -1.01
SFXN1-202ENST00000421887 MAFBQ9Y5Q3 323 aaPredicted RBP8.74□□□□□ -1.01
SFXN1-202ENST00000421887 PPRC1Q5VV67 1664 aaKnown RBP8.74□□□□□ -1.01
SFXN1-202ENST00000421887 TTBK1Q5TCY1 1321 aaPredicted RBP8.74□□□□□ -1.01
SFXN1-202ENST00000421887 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
SFXN1-202ENST00000421887 FOXO3O43524 673 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 HOXD8P13378 290 aaPredicted RBP8.73□□□□□ -1.01
SFXN1-202ENST00000421887 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
SFXN1-202ENST00000421887 CDC27P30260 824 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 HOXA10P31260 410 aaPredicted RBP8.73□□□□□ -1.01
SFXN1-202ENST00000421887 ATP11AP98196 1134 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 BEND4Q6ZU67 534 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 SPACA7Q96KW9 195 aa8.73□□□□□ -1.01
SFXN1-202ENST00000421887 PLB1Q6P1J6 1458 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
SFXN1-202ENST00000421887 FAM117BQ6P1L5 589 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 NLRP13Q86W25 1043 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 KRTAP4-9Q9BYQ8 210 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.01
SFXN1-202ENST00000421887 ANGEL1Q9UNK9 670 aaKnown RBP8.72□□□□□ -1.01
SFXN1-202ENST00000421887 GLI2P10070 1586 aa8.72□□□□□ -1.01
SFXN1-202ENST00000421887 FSCN2O14926 492 aa8.71□□□□□ -1.02
SFXN1-202ENST00000421887 UBASH3BQ8TF42 649 aa8.71□□□□□ -1.02
SFXN1-202ENST00000421887 ASXL2Q76L83 1435 aa8.71□□□□□ -1.02
SFXN1-202ENST00000421887 CUL7Q14999 1698 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 WEE1P30291 646 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 KLHL23Q8NBE8 558 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 PTPRGP23470 1445 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L15C9J2P7 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L13C9JLJ4 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L11C9JVI0 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L21D6R901 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L18D6R9N7 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L22D6RA61 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L17D6RBQ6 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L19D6RCP7 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L20D6RJB6 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 USP17L24Q0WX57 530 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
SFXN1-202ENST00000421887 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
SFXN1-202ENST00000421887 PIM2Q9P1W9 311 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 BIVM-ERCC5R4GMW8 1640 aa8.69□□□□□ -1.02
SFXN1-202ENST00000421887 ADAM11O75078 769 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 C8AP07357 584 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 PREPP48147 710 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 HYAL2Q12891 473 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.68□□□□□ -1.02
SFXN1-202ENST00000421887 KLHDC7BQ96G42 594 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms