RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 TRIM56Q9BRZ2 755 aaKnown RBP9.19□□□□□ -0.94
LINC00317-201ENST00000419069 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
LINC00317-201ENST00000419069 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
LINC00317-201ENST00000419069 HMGB1P09429 215 aaKnown RBP9.18□□□□□ -0.94
LINC00317-201ENST00000419069 FGRP09769 529 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 HOXD8P13378 290 aaPredicted RBP9.18□□□□□ -0.94
LINC00317-201ENST00000419069 SOGA3Q5TF21 947 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 GMCL1Q96IK5 515 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 NDFIP2Q9NV92 336 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 PHF24Q9UPV7 400 aa9.18□□□□□ -0.94
LINC00317-201ENST00000419069 ST8SIA5O15466 376 aa9.17□□□□□ -0.94
LINC00317-201ENST00000419069 EIF4A3P38919 411 aaKnown RBP9.17□□□□□ -0.94
LINC00317-201ENST00000419069 NRLP54845 237 aa9.17□□□□□ -0.94
LINC00317-201ENST00000419069 CEP120Q8N960 986 aa9.17□□□□□ -0.94
LINC00317-201ENST00000419069 GTPBP3Q969Y2 492 aaKnown RBP9.17□□□□□ -0.94
LINC00317-201ENST00000419069 DZANK1Q9NVP4 752 aa9.17□□□□□ -0.94
LINC00317-201ENST00000419069 ADAMTS1Q9UHI8 967 aa9.17□□□□□ -0.94
LINC00317-201ENST00000419069 TRPA1O75762 1119 aa9.16□□□□□ -0.94
LINC00317-201ENST00000419069 GRIA4P48058 902 aa9.16□□□□□ -0.94
LINC00317-201ENST00000419069 RASGRP4Q8TDF6 673 aa9.16□□□□□ -0.94
LINC00317-201ENST00000419069 ASAP3Q8TDY4 903 aa9.16□□□□□ -0.94
LINC00317-201ENST00000419069 ZNF837Q96EG3 531 aaPredicted RBP9.16□□□□□ -0.94
LINC00317-201ENST00000419069 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
LINC00317-201ENST00000419069 SSBP05455 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00317-201ENST00000419069 FGFR3P22607 806 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 LIG3P49916 1009 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
LINC00317-201ENST00000419069 SPRED3Q2MJR0 410 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 CCDC144BQ3MJ40 725 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 NOP9Q86U38 636 aaKnown RBP9.15□□□□□ -0.94
LINC00317-201ENST00000419069 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 SEC16BQ96JE7 1060 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 PUS7Q96PZ0 661 aaKnown RBP9.15□□□□□ -0.94
LINC00317-201ENST00000419069 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 PRR12Q9ULL5 1215 aa9.15□□□□□ -0.94
LINC00317-201ENST00000419069 A0A096LPE4 126 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 A0A1W2PPZ6 126 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 METTL12A8MUP2 240 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 PDE2AO00408 941 aaPredicted RBP9.14□□□□□ -0.95
LINC00317-201ENST00000419069 GHRHP01286 108 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 CELA3AP09093 270 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 GPLD1P80108 840 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 RBL2Q08999 1139 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 TBC1D8BQ0IIM8 1120 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 FOXR1Q6PIV2 292 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 TMEM102Q8N9M5 508 aaPredicted RBP9.14□□□□□ -0.95
LINC00317-201ENST00000419069 PHC3Q8NDX5 983 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
LINC00317-201ENST00000419069 TRERF1Q96PN7 1200 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 HHIPQ96QV1 700 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 BHLHE41Q9C0J9 482 aaPredicted RBP9.14□□□□□ -0.95
LINC00317-201ENST00000419069 AAASQ9NRG9 546 aa9.14□□□□□ -0.95
LINC00317-201ENST00000419069 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
LINC00317-201ENST00000419069 ITGA6P23229 1130 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 ITPKAP23677 461 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 NASPP49321 788 aaPredicted RBP9.13□□□□□ -0.95
LINC00317-201ENST00000419069 SIK1P57059 783 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 PCSK7Q16549 785 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 SNAP47Q5SQN1 464 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 FAM182BQ5T319 152 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 GIMAP6Q6P9H5 292 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 TRPM4Q8TD43 1214 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 PBX4Q9BYU1 374 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 UBE2OQ9C0C9 1292 aaKnown RBP9.13□□□□□ -0.95
LINC00317-201ENST00000419069 GPN3Q9UHW5 284 aaPredicted RBP9.13□□□□□ -0.95
LINC00317-201ENST00000419069 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
LINC00317-201ENST00000419069 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
LINC00317-201ENST00000419069 J3QW42 95 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
LINC00317-201ENST00000419069 LMNB1P20700 586 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 RPS26P11Q5JNZ5 115 aaPredicted RBP9.12□□□□□ -0.95
LINC00317-201ENST00000419069 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 RHOVQ96L33 236 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 RASSF4Q9H2L5 321 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 EFR3BQ9Y2G0 817 aa9.12□□□□□ -0.95
LINC00317-201ENST00000419069 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
LINC00317-201ENST00000419069 PF4P02776 101 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 ATP11AP98196 1134 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
LINC00317-201ENST00000419069 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 EAF1Q96JC9 268 aaPredicted RBP9.11□□□□□ -0.95
LINC00317-201ENST00000419069 NECAB3Q96P71 396 aaPredicted RBP9.11□□□□□ -0.95
LINC00317-201ENST00000419069 NT5C1AQ9BXI3 368 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 DACH1Q9UI36 760 aa9.11□□□□□ -0.95
LINC00317-201ENST00000419069 NFKBIEO00221 500 aa9.1□□□□□ -0.95
LINC00317-201ENST00000419069 ENC1O14682 589 aa9.1□□□□□ -0.95
LINC00317-201ENST00000419069 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00317-201ENST00000419069 LMNB2Q03252 620 aa9.1□□□□□ -0.95
LINC00317-201ENST00000419069 PPP2R3AQ06190 1150 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms