RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 CTSWP56202 376 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 NEXNQ0ZGT2 675 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 SCAF8Q9UPN6 1271 aaKnown RBP12.91□□□□□ -0.34
MDC1-202ENST00000416571 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 MAP3K2Q9Y2U5 619 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
MDC1-202ENST00000416571 NBPF9Q3BBW0 867 aa12.9□□□□□ -0.34
MDC1-202ENST00000416571 PRAMEF18Q5VWM3 479 aa12.9□□□□□ -0.34
MDC1-202ENST00000416571 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
MDC1-202ENST00000416571 WNT10BO00744 389 aa12.89□□□□□ -0.35
MDC1-202ENST00000416571 APAF1O14727 1248 aa12.89□□□□□ -0.35
MDC1-202ENST00000416571 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
MDC1-202ENST00000416571 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
MDC1-202ENST00000416571 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
MDC1-202ENST00000416571 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
MDC1-202ENST00000416571 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
MDC1-202ENST00000416571 MMP14P50281 582 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
MDC1-202ENST00000416571 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 GREM2Q9H772 168 aa12.88□□□□□ -0.35
MDC1-202ENST00000416571 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 GPR25O00155 361 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 SASH1O94885 1247 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 TM4SF4P48230 202 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 PRKG1Q13976 671 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
MDC1-202ENST00000416571 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
MDC1-202ENST00000416571 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
MDC1-202ENST00000416571 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
MDC1-202ENST00000416571 FKTNO75072 461 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 KCNJ4P48050 445 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
MDC1-202ENST00000416571 HABP4Q5JVS0 413 aaKnown RBP12.86□□□□□ -0.35
MDC1-202ENST00000416571 TTLL5Q6EMB2 1281 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
MDC1-202ENST00000416571 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
MDC1-202ENST00000416571 CWF19L2Q2TBE0 894 aaKnown RBP12.85□□□□□ -0.35
MDC1-202ENST00000416571 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
MDC1-202ENST00000416571 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
MDC1-202ENST00000416571 ALDH1A1P00352 501 aa12.84□□□□□ -0.35
MDC1-202ENST00000416571 GTF2IP78347 998 aa12.84□□□□□ -0.35
MDC1-202ENST00000416571 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
MDC1-202ENST00000416571 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
MDC1-202ENST00000416571 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
MDC1-202ENST00000416571 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
MDC1-202ENST00000416571 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 ITGA6P23229 1130 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 SPRYD7Q5W111 196 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
MDC1-202ENST00000416571 ECM29Q5VYK3 1845 aa12.83□□□□□ -0.36
MDC1-202ENST00000416571 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
MDC1-202ENST00000416571 H7C1W4 665 aa12.82□□□□□ -0.36
MDC1-202ENST00000416571 MYO1BO43795 1136 aa12.82□□□□□ -0.36
MDC1-202ENST00000416571 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
MDC1-202ENST00000416571 INHBEP58166 350 aa12.82□□□□□ -0.36
MDC1-202ENST00000416571 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
MDC1-202ENST00000416571 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 KLRK1P26718 216 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 CHRNDQ07001 517 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
MDC1-202ENST00000416571 LDLRAD1Q5T700 205 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
MDC1-202ENST00000416571 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
MDC1-202ENST00000416571 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
MDC1-202ENST00000416571 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
MDC1-202ENST00000416571 FKBP5Q13451 457 aaPredicted RBP12.8□□□□□ -0.36
MDC1-202ENST00000416571 GCKRQ14397 625 aa12.8□□□□□ -0.36
MDC1-202ENST00000416571 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
MDC1-202ENST00000416571 CD209Q9NNX6 404 aa12.8□□□□□ -0.36
MDC1-202ENST00000416571 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
MDC1-202ENST00000416571 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
MDC1-202ENST00000416571 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
MDC1-202ENST00000416571 FLIIQ13045 1269 aa12.79□□□□□ -0.36
MDC1-202ENST00000416571 SUPT20HL1Q3ZLR7 823 aa12.79□□□□□ -0.36
MDC1-202ENST00000416571 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms