RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
HNF4A-204ENST00000415691 ITGA6P23229 1130 aa15.78■□□□□ 0.12
HNF4A-204ENST00000415691 PTPN12Q05209 780 aaKnown RBP15.78■□□□□ 0.12
HNF4A-204ENST00000415691 SIL1Q9H173 461 aa15.78■□□□□ 0.12
HNF4A-204ENST00000415691 GSPT1P15170 499 aaKnown RBP15.77■□□□□ 0.12
HNF4A-204ENST00000415691 ST5P78524 1137 aa15.77■□□□□ 0.12
HNF4A-204ENST00000415691 CCDC57Q2TAC2 916 aa15.77■□□□□ 0.12
HNF4A-204ENST00000415691 RNF214Q8ND24 703 aa15.77■□□□□ 0.12
HNF4A-204ENST00000415691 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.11
HNF4A-204ENST00000415691 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.11
HNF4A-204ENST00000415691 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 CTIFO43310 598 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 SYCP1Q15431 976 aa15.76■□□□□ 0.11
HNF4A-204ENST00000415691 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 PUS3Q9BZE2 481 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
HNF4A-204ENST00000415691 BRD1O95696 1058 aa15.76■□□□□ 0.11
HNF4A-204ENST00000415691 TPM3P06753 285 aa15.76■□□□□ 0.11
HNF4A-204ENST00000415691 HSP90B1P14625 803 aaKnown RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
HNF4A-204ENST00000415691 CCDC152Q4G0S7 254 aa15.76■□□□□ 0.11
HNF4A-204ENST00000415691 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
HNF4A-204ENST00000415691 MCM2P49736 904 aa15.75■□□□□ 0.11
HNF4A-204ENST00000415691 TTC22Q5TAA0 569 aa15.75■□□□□ 0.11
HNF4A-204ENST00000415691 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
HNF4A-204ENST00000415691 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 CHAF1AQ13111 956 aaPredicted RBP15.74■□□□□ 0.11
HNF4A-204ENST00000415691 LRRC24Q50LG9 513 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 PLEKHM2Q8IWE5 1019 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 COPRSQ9NQ92 184 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 OGFRQ9NZT2 677 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.74■□□□□ 0.11
HNF4A-204ENST00000415691 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
HNF4A-204ENST00000415691 CASC1Q6TDU7 716 aa15.73■□□□□ 0.11
HNF4A-204ENST00000415691 TSC1Q92574 1164 aa15.73■□□□□ 0.11
HNF4A-204ENST00000415691 CASZ1Q86V15 1759 aa15.73■□□□□ 0.11
HNF4A-204ENST00000415691 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
HNF4A-204ENST00000415691 TAF7LQ5H9L4 462 aa15.73■□□□□ 0.11
HNF4A-204ENST00000415691 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
HNF4A-204ENST00000415691 COL4A1P02462 1669 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 SASH1O94885 1247 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 REC8O95072 547 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.118e-9■□□□□ 9.7
HNF4A-204ENST00000415691 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
HNF4A-204ENST00000415691 ATG9AQ7Z3C6 839 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 KLRG2A4D1S0 409 aaPredicted RBP15.72■□□□□ 0.11
HNF4A-204ENST00000415691 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
HNF4A-204ENST00000415691 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
HNF4A-204ENST00000415691 INTS4Q96HW7 963 aaKnown RBP15.72■□□□□ 0.11
HNF4A-204ENST00000415691 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
HNF4A-204ENST00000415691 CUL4AQ13619 759 aa15.71■□□□□ 0.11
HNF4A-204ENST00000415691 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
HNF4A-204ENST00000415691 EYA2O00167 538 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 PTGER2P43116 358 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.1
HNF4A-204ENST00000415691 KIAA1524Q8TCG1 905 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 RHPN1Q8TCX5 695 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 SGIP1Q9BQI5 828 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 IL1RAPL2Q9NP60 686 aa15.71■□□□□ 0.1
HNF4A-204ENST00000415691 POLD1P28340 1107 aa15.7■□□□□ 0.1
HNF4A-204ENST00000415691 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
HNF4A-204ENST00000415691 RPGRQ92834 1020 aaKnown RBP15.7■□□□□ 0.1
HNF4A-204ENST00000415691 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
HNF4A-204ENST00000415691 RAB11FIP3O75154 756 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 ADCY5O95622 1261 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 CHRNA5P30532 468 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 PDE6BP35913 854 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 TFCP2Q12800 502 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
HNF4A-204ENST00000415691 RIPOR2Q9Y4F9 1068 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 MYH3P11055 1940 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 LAMB2P55268 1798 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 SOCS7O14512 581 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 SRGNP10124 158 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
HNF4A-204ENST00000415691 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
HNF4A-204ENST00000415691 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 TAF1P21675 1872 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 RIC1Q4ADV7 1423 aa15.69■□□□□ 0.1
HNF4A-204ENST00000415691 C2CD5Q86YS7 1000 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 ANKRD18AQ8IVF6 992 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 MPHOSPH8Q99549 860 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 IGHMBP2P38935 993 aaKnown RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 SLC20A2Q08357 652 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 CCDC183Q5T5S1 534 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 OTUD7AQ8TE49 926 aaPredicted RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 RBM17Q96I25 401 aaKnown RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 NAP1L2Q9ULW6 460 aaPredicted RBP15.68■□□□□ 0.1
HNF4A-204ENST00000415691 ANKRD31Q8N7Z5 1873 aa15.68■□□□□ 0.1
HNF4A-204ENST00000415691 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
HNF4A-204ENST00000415691 CIAO1O76071 339 aa15.67■□□□□ 0.1
HNF4A-204ENST00000415691 U2AF2P26368 475 aaKnown RBP eCLIP15.67■□□□□ 0.11e-26■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms