RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 HOXB4P17483 251 aaPredicted RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 GTF2E1P29083 439 aaPredicted RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 SCTRP47872 440 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 MCCD1P59942 119 aaPredicted RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 NEUROD1Q13562 356 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 TRIM34Q9BYJ4 488 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 OSBPL3Q9H4L5 887 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 SUV39H2Q9H5I1 410 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 TERF2IPQ9NYB0 399 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 PPP1R1BQ9UD71 204 aaPredicted RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 ATXN7L1Q9ULK2 861 aaPredicted RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 ADGRL2O95490 1459 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 RPRD2Q5VT52 1461 aaKnown RBP5.06□□□□□ -1.6
LINC01048-201ENST00000414480 NUP188Q5SRE5 1749 aa5.06□□□□□ -1.6
LINC01048-201ENST00000414480 GCC2Q8IWJ2 1684 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 RREB1Q92766 1687 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 RRP9O43818 475 aaKnown RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 GNRH1P01148 92 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 FBXO45P0C2W1 286 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 CSB-PGBD3P0DP91 1061 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 CALRP27797 417 aaKnown RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 IRX3P78415 501 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 XPCQ01831 940 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 UBAP2LQ14157 1087 aaKnown RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 RALBP1Q15311 655 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 WDR78Q5VTH9 848 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 RINLQ6ZS11 566 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 APBB1IPQ7Z5R6 666 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 CD163Q86VB7 1156 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 PGBD3Q8N328 593 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 RETREG2Q8NC44 543 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 TRIM44Q96DX7 344 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 CCDC97Q96F63 343 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 ESYT1Q9BSJ8 1104 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 PDGFDQ9GZP0 370 aaPredicted RBP5.05□□□□□ -1.6
LINC01048-201ENST00000414480 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 PCDHB11Q9Y5F2 797 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 USP32Q8NFA0 1604 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 PTPN23Q9H3S7 1636 aa5.05□□□□□ -1.6
LINC01048-201ENST00000414480 NRKQ7Z2Y5 1582 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 SPATA31A3Q5VYP0 1347 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 NPHP3Q7Z494 1330 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 SHANK3Q9BYB0 1731 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 FAM83GA6ND36 823 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 FOXO3O43524 673 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 TRIM37O94972 964 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 RFC5P40937 340 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 DGKGP49619 791 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 EFHC2Q5JST6 749 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 GNASQ5JWF2 1037 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 CNKSR1Q969H4 720 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 SPATA32Q96LK8 384 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 ZSCAN10Q96SZ4 725 aaPredicted RBP5.04□□□□□ -1.6
LINC01048-201ENST00000414480 SYT17Q9BSW7 474 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 PCGF6Q9BYE7 350 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 RAB6BQ9NRW1 208 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 RRP7BPQ9NSQ0 103 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 GGA1Q9UJY5 639 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 PPME1Q9Y570 386 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 THSD7AQ9UPZ6 1657 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 ABCC5O15440 1437 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 KANK1Q14678 1352 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
LINC01048-201ENST00000414480 CHD4Q14839 1912 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 TTC36A6NLP5 189 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 APBA3O96018 575 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 IL2RAP01589 272 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 EPXP11678 715 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 HSPA6P17066 643 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 FGFR3P22607 806 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 CHRNA4P43681 627 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 PHKA2P46019 1235 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 PRELPP51888 382 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 CENPCQ03188 943 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 HSP90AA2PQ14568 343 aaPredicted RBP5.03□□□□□ -1.6
LINC01048-201ENST00000414480 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
LINC01048-201ENST00000414480 COL13A1Q5TAT6 717 aaPredicted RBP5.03□□□□□ -1.6
LINC01048-201ENST00000414480 ABHD17AQ96GS6 310 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 SGSM3Q96HU1 749 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 FHDC1Q9C0D6 1143 aaPredicted RBP5.03□□□□□ -1.6
LINC01048-201ENST00000414480 KDM4CQ9H3R0 1056 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 ZNF330Q9Y3S2 320 aaPredicted RBP5.03□□□□□ -1.6
LINC01048-201ENST00000414480 PRAG1Q86YV5 1406 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 CASZ1Q86V15 1759 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 NWD2Q9ULI1 1742 aa5.03□□□□□ -1.6
LINC01048-201ENST00000414480 MYOM1P52179 1685 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 PLCH1Q4KWH8 1693 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 SPATA31A5Q5VU36 1347 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 SPATA31A7Q8IWB4 1347 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 C2CD2LO14523 706 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 NRDCO43847 1150 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 ARAFP10398 606 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 ERCC3P19447 782 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 NBPF8Q3BBV2 869 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 ZMYM1Q5SVZ6 1142 aa5.02□□□□□ -1.61
LINC01048-201ENST00000414480 TMEM214Q6NUQ4 689 aaKnown RBP5.02□□□□□ -1.61
LINC01048-201ENST00000414480 RNF135Q8IUD6 432 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms