RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 VPS33BQ9H267 617 aa37.79■■■■□ 3.64
CSNK1E-206ENST00000413574 IGHDP01880 384 aa37.79■■■■□ 3.64
CSNK1E-206ENST00000413574 DBNDD1Q9H9R9 158 aa37.79■■■■□ 3.64
CSNK1E-206ENST00000413574 TIMM10P62072 90 aa37.78■■■■□ 3.64
CSNK1E-206ENST00000413574 RHPN1Q8TCX5 695 aa37.77■■■■□ 3.64
CSNK1E-206ENST00000413574 LPIN2Q92539 896 aa37.77■■■■□ 3.64
CSNK1E-206ENST00000413574 ERC1Q8IUD2 1116 aa37.76■■■■□ 3.64
CSNK1E-206ENST00000413574 BCL11AQ9H165 835 aa37.76■■■■□ 3.64
CSNK1E-206ENST00000413574 GYG1P46976 350 aa37.76■■■■□ 3.63
CSNK1E-206ENST00000413574 JDP2Q8WYK2 163 aa37.76■■■■□ 3.63
CSNK1E-206ENST00000413574 IL1RAPL2Q9NP60 686 aa37.76■■■■□ 3.63
CSNK1E-206ENST00000413574 C15orf52Q6ZUT6 534 aaKnown RBP37.75■■■■□ 3.63
CSNK1E-206ENST00000413574 NIM1KQ8IY84 436 aa37.75■■■■□ 3.63
CSNK1E-206ENST00000413574 AKAP2Q9Y2D5 859 aa37.75■■■■□ 3.63
CSNK1E-206ENST00000413574 ARAP2Q8WZ64 1704 aa37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 ZNF609O15014 1411 aa37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 A0A1B0GUL7 405 aa37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 RAB11FIP3O75154 756 aa37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 IFIT1P09914 478 aaKnown RBP37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 SLC5A1P13866 664 aa37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 RWDD1Q9H446 243 aaPredicted RBP37.74■■■■□ 3.63
CSNK1E-206ENST00000413574 ADORA1P30542 326 aa37.73■■■■□ 3.63
CSNK1E-206ENST00000413574 KIF1BPQ96EK5 621 aa37.73■■■■□ 3.63
CSNK1E-206ENST00000413574 NEUROD6Q96NK8 337 aa37.73■■■■□ 3.63
CSNK1E-206ENST00000413574 G3V3G9 751 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 ECE2O60344 883 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 TNNI3KQ59H18 835 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 DCAF8Q5TAQ9 597 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 FAM84BQ96KN1 310 aaPredicted RBP37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 FPGT-TNNI3KV9GXZ4 949 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 SCN9AQ15858 1988 aa37.72■■■■□ 3.63
CSNK1E-206ENST00000413574 YDJCA8MPS7 323 aa37.71■■■■□ 3.63
CSNK1E-206ENST00000413574 SMARCA5O60264 1052 aaPredicted RBP37.71■■■■□ 3.63
CSNK1E-206ENST00000413574 KCNQ5Q9NR82 932 aa37.71■■■■□ 3.63
CSNK1E-206ENST00000413574 BCAMP50895 628 aa37.7■■■■□ 3.63
CSNK1E-206ENST00000413574 GPR108Q9NPR9 543 aa37.7■■■■□ 3.63
CSNK1E-206ENST00000413574 ZNRF3Q9ULT6 936 aa37.7■■■■□ 3.63
CSNK1E-206ENST00000413574 EAF2Q96CJ1 260 aaPredicted RBP37.69■■■■□ 3.62
CSNK1E-206ENST00000413574 XAGE2Q96GT9 111 aa37.69■■■■□ 3.62
CSNK1E-206ENST00000413574 LRRCC1Q9C099 1032 aa37.69■■■■□ 3.62
CSNK1E-206ENST00000413574 FZD9O00144 591 aa37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 HIBADHP31937 336 aaKnown RBP37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 ZNF804AQ7Z570 1209 aa37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 COA1Q9GZY4 146 aa37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 CCDC8Q9H0W5 538 aaPredicted RBP37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 CD209Q9NNX6 404 aa37.68■■■■□ 3.62
CSNK1E-206ENST00000413574 FBXO33Q7Z6M2 555 aa37.67■■■■□ 3.62
CSNK1E-206ENST00000413574 CAVIN4Q5BKX8 364 aa37.66■■■■□ 3.62
CSNK1E-206ENST00000413574 TLR7Q9NYK1 1049 aaKnown RBP37.66■■■■□ 3.62
CSNK1E-206ENST00000413574 ZNF541Q9H0D2 1346 aa37.66■■■■□ 3.62
CSNK1E-206ENST00000413574 AACSQ86V21 672 aa37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 VPS37DQ86XT2 251 aa37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 GCC1Q96CN9 775 aa37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 IQSEC3Q9UPP2 1182 aaPredicted RBP37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 RAD17O75943 681 aa37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 DBNDD2Q9BQY9 259 aa37.65■■■■□ 3.62
CSNK1E-206ENST00000413574 CLASRPQ8N2M8 674 aaKnown RBP37.64■■■■□ 3.62
CSNK1E-206ENST00000413574 PHKA1P46020 1223 aa37.63■■■■□ 3.61
CSNK1E-206ENST00000413574 PODNQ7Z5L7 613 aa37.63■■■■□ 3.61
CSNK1E-206ENST00000413574 CXCL9Q07325 125 aa37.62■■■■□ 3.61
CSNK1E-206ENST00000413574 SMC5Q8IY18 1101 aa37.62■■■■□ 3.61
CSNK1E-206ENST00000413574 DBNLQ9UJU6 430 aaKnown RBP37.62■■■■□ 3.61
CSNK1E-206ENST00000413574 IL1R1P14778 569 aa37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 EIF6P56537 245 aaKnown RBP37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 PSME4Q14997 1843 aa37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 B4GALNT3Q6L9W6 998 aa37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 ANKRD45Q5TZF3 282 aa37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 CCDC102BQ68D86 513 aa37.61■■■■□ 3.61
CSNK1E-206ENST00000413574 MYH13Q9UKX3 1938 aa37.6■■■■□ 3.61
CSNK1E-206ENST00000413574 ZC3H4Q9UPT8 1303 aaKnown RBP37.6■■■■□ 3.61
CSNK1E-206ENST00000413574 GORABQ5T7V8 394 aa37.6■■■■□ 3.61
CSNK1E-206ENST00000413574 ZNF646O15015 1829 aaPredicted RBP37.6■■■■□ 3.61
CSNK1E-206ENST00000413574 TDRD7Q8NHU6 1098 aaKnown RBP37.59■■■■□ 3.61
CSNK1E-206ENST00000413574 JAG2Q9Y219 1238 aa37.59■■■■□ 3.61
CSNK1E-206ENST00000413574 FBXW7Q969H0 707 aa37.58■■■■□ 3.61
CSNK1E-206ENST00000413574 GJA3Q9Y6H8 435 aa37.58■■■■□ 3.61
CSNK1E-206ENST00000413574 PSMD14O00487 310 aa37.57■■■■□ 3.6
CSNK1E-206ENST00000413574 CIAPIN1Q6FI81 312 aa37.57■■■■□ 3.6
CSNK1E-206ENST00000413574 DDNO94850 711 aaPredicted RBP37.56■■■■□ 3.6
CSNK1E-206ENST00000413574 IFIT2P09913 472 aaKnown RBP37.56■■■■□ 3.6
CSNK1E-206ENST00000413574 GTF2IP78347 998 aa37.56■■■■□ 3.6
CSNK1E-206ENST00000413574 C16orf71Q8IYS4 520 aaPredicted RBP37.55■■■■□ 3.6
CSNK1E-206ENST00000413574 FRAT2O75474 233 aaPredicted RBP37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 MXD3Q9BW11 206 aa37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 USP17L3A6NCW0 530 aa37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 USP17L4A6NCW7 530 aa37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 TTLL5Q6EMB2 1281 aa37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 USP17L1Q7RTZ2 530 aa37.54■■■■□ 3.6
CSNK1E-206ENST00000413574 DPY19L2Q6NUT2 758 aa37.53■■■■□ 3.6
CSNK1E-206ENST00000413574 GNL3LQ9NVN8 582 aaKnown RBP37.53■■■■□ 3.6
CSNK1E-206ENST00000413574 COL1A1P02452 1464 aaPredicted RBP37.53■■■■□ 3.6
CSNK1E-206ENST00000413574 GLTPD2A6NH11 291 aa37.52■■■■□ 3.6
CSNK1E-206ENST00000413574 ZBTB12Q9Y330 459 aaPredicted RBP37.52■■■■□ 3.6
CSNK1E-206ENST00000413574 CHAF1AQ13111 956 aaPredicted RBP37.51■■■■□ 3.6
CSNK1E-206ENST00000413574 TNIP1Q15025 636 aa37.51■■■■□ 3.6
CSNK1E-206ENST00000413574 CCDC158Q5M9N0 1113 aa37.51■■■■□ 3.6
CSNK1E-206ENST00000413574 GPC2Q8N158 579 aa37.51■■■■□ 3.6
CSNK1E-206ENST00000413574 TTC39AQ5SRH9 613 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 ZNF526Q8TF50 670 aaPredicted RBP37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 CCDC136Q96JN2 1154 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms