RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 YBX3P16989 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
NR1I3-208ENST00000412844 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
NR1I3-208ENST00000412844 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
NR1I3-208ENST00000412844 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-208ENST00000412844 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
NR1I3-208ENST00000412844 TIMP2P16035 220 aa9.46□□□□□ -0.9
NR1I3-208ENST00000412844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-208ENST00000412844 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
NR1I3-208ENST00000412844 DNAAF2Q9NVR5 837 aaKnown RBP9.46□□□□□ -0.9
NR1I3-208ENST00000412844 FAM196BA6NMK8 535 aa9.45□□□□□ -0.9
NR1I3-208ENST00000412844 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-208ENST00000412844 LILRA1O75019 489 aa9.45□□□□□ -0.9
NR1I3-208ENST00000412844 DGAT1O75907 488 aa9.45□□□□□ -0.9
NR1I3-208ENST00000412844 ZCRB1Q8TBF4 217 aaKnown RBP9.45□□□□□ -0.9
NR1I3-208ENST00000412844 ZNF594Q96JF6 807 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-208ENST00000412844 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-208ENST00000412844 RTL1A6NKG5 1358 aa9.45□□□□□ -0.9
NR1I3-208ENST00000412844 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L10C9JJH3 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L12C9JPN9 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L21D6R901 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 UPP2O95045 317 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-208ENST00000412844 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-208ENST00000412844 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 NSD2O96028 1365 aa9.44□□□□□ -0.9
NR1I3-208ENST00000412844 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
NR1I3-208ENST00000412844 ATG7O95352 703 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 ADH1AP07327 375 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 CLDN10P78369 228 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 CBLBQ13191 982 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 NME9Q86XW9 330 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 SMARCC1Q92922 1105 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-208ENST00000412844 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
NR1I3-208ENST00000412844 C5P01031 1676 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 CD163L1Q9NR16 1453 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 GNRH1P01148 92 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-208ENST00000412844 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 Q6ZVU0 165 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 COG3Q96JB2 828 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
NR1I3-208ENST00000412844 KIF24Q5T7B8 1368 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 TOMM70O94826 608 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 AVPP01185 164 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
NR1I3-208ENST00000412844 AMPHP49418 695 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 PDE4CQ08493 712 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 PTK7Q13308 1070 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
NR1I3-208ENST00000412844 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
NR1I3-208ENST00000412844 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-208ENST00000412844 A0A1W2PP64 1363 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 AXIN1O15169 862 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 SSFA2P28290 1259 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 HOXC9P31274 260 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 ELOAQ14241 798 aaKnown RBP9.4□□□□□ -0.9
NR1I3-208ENST00000412844 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 HOMEZQ8IX15 550 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 SIX5Q8N196 739 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
NR1I3-208ENST00000412844 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
NR1I3-208ENST00000412844 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-208ENST00000412844 RELBQ01201 579 aa9.39□□□□□ -0.91
NR1I3-208ENST00000412844 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-208ENST00000412844 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
NR1I3-208ENST00000412844 TAF1LQ8IZX4 1826 aa9.39□□□□□ -0.91
NR1I3-208ENST00000412844 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 MEGF6O75095 1541 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 BACH1O14867 736 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 GDF10P55107 478 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 SEC13P55735 322 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 KCNQ4P56696 695 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 DPYDQ12882 1025 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 SCARF1Q14162 830 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 MSL1Q68DK7 614 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 ZNF526Q8TF50 670 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-208ENST00000412844 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 SLC12A5Q9H2X9 1139 aa9.38□□□□□ -0.91
NR1I3-208ENST00000412844 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms