RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 MRPL50Q8N5N7 158 aaKnown RBP18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 MKRN1Q9UHC7 482 aaKnown RBP18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
NIF3L1-205ENST00000409588 RSBN1LQ6PCB5 846 aaPredicted RBP18.37■□□□□ 0.53
NIF3L1-205ENST00000409588 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
NIF3L1-205ENST00000409588 ZNF804BA4D1E1 1349 aa18.37■□□□□ 0.53
NIF3L1-205ENST00000409588 PCNTO95613 3336 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 UTYO14607 1347 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 COL4A1P02462 1669 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 ECE1P42892 770 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 MYO3BQ8WXR4 1341 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 DCPSQ96C86 337 aaKnown RBP18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 HHIPL1Q96JK4 782 aa18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
NIF3L1-205ENST00000409588 C19orf67A6NJJ6 358 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 USP17L8P0C7I0 530 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 KCNJ4P48050 445 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 VEGFBP49765 207 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 CST9Q5W186 159 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 C15orf52Q6ZUT6 534 aaKnown RBP18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 GPR101Q96P66 508 aaPredicted RBP18.35■□□□□ 0.53
NIF3L1-205ENST00000409588 CHRNDQ07001 517 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 TRPM4Q8TD43 1214 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 GMLQ99445 158 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
NIF3L1-205ENST00000409588 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 OGFOD1Q8N543 542 aa18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
NIF3L1-205ENST00000409588 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 HSPA1AP0DMV8 641 aaKnown RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 HSPA1BP0DMV9 641 aaKnown RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 TBC1D10BQ4KMP7 808 aaPredicted RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 GLIS2Q9BZE0 524 aaPredicted RBP18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
NIF3L1-205ENST00000409588 TRAF5O00463 557 aa18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 CELF2O95319 508 aaKnown RBP18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 TTLL5Q6EMB2 1281 aa18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 SAPCD2Q86UD0 394 aa18.31■□□□□ 0.52
NIF3L1-205ENST00000409588 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 MAP2K2P36507 400 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 SULF1Q8IWU6 871 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 AIDAQ96BJ3 306 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
NIF3L1-205ENST00000409588 PITPNM2Q9BZ72 1349 aa18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 EPHA10Q5JZY3 1008 aa18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 CD209Q9NNX6 404 aa18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
NIF3L1-205ENST00000409588 UBE4AQ14139 1066 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 SCARF1Q14162 830 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 TXNRD3Q86VQ6 643 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 CAPNS2Q96L46 248 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 WBP1LQ9NX94 342 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 HDAC9Q9UKV0 1011 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 TRPM7Q96QT4 1865 aa18.28■□□□□ 0.52
NIF3L1-205ENST00000409588 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 EGFRP00533 1210 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 IL1R1P14778 569 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 FKBP1AP62942 108 aaKnown RBP18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 SUCLG2Q96I99 432 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
NIF3L1-205ENST00000409588 SCN9AQ15858 1988 aa18.26■□□□□ 0.51
NIF3L1-205ENST00000409588 TAF5LO75529 589 aa18.26■□□□□ 0.51
NIF3L1-205ENST00000409588 CTCFP49711 727 aaPredicted RBP18.26■□□□□ 0.51
NIF3L1-205ENST00000409588 BEGAINQ9BUH8 593 aa18.26■□□□□ 0.51
NIF3L1-205ENST00000409588 SASH1O94885 1247 aa18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 FKBP1BP68106 108 aa18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 PAXIP1Q6ZW49 1069 aaPredicted RBP18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 BICC1Q9H694 974 aaKnown RBP18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 PRDM10Q9NQV6 1147 aa18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 PSME4Q14997 1843 aa18.25■□□□□ 0.51
NIF3L1-205ENST00000409588 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 PRR29P0C7W0 189 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms