RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PLCD3Q8N3E9 789 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 TM6SF1Q9BZW5 370 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 FAM208AQ9UK61 1670 aaKnown RBP15.69■□□□□ 0.1
COL6A2-204ENST00000409416 PXDNLA1KZ92 1463 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
COL6A2-204ENST00000409416 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
COL6A2-204ENST00000409416 PRDM1O75626 825 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 SLAIN2Q9P270 581 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 NR1I2O75469 434 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-204ENST00000409416 PHKBQ93100 1093 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 NRBP1Q9UHY1 535 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 A0A1B0GVL5 298 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 MTX1Q13505 466 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 FAM200AQ8TCP9 573 aa15.68■□□□□ 0.1
COL6A2-204ENST00000409416 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL6A2-204ENST00000409416 V9GYY5 206 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-204ENST00000409416 TOB2Q14106 344 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-204ENST00000409416 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-204ENST00000409416 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
COL6A2-204ENST00000409416 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
COL6A2-204ENST00000409416 ZNF165P49910 485 aa15.67■□□□□ 0.1
COL6A2-204ENST00000409416 CBX1P83916 185 aa15.67■□□□□ 0.1
COL6A2-204ENST00000409416 SYNE3Q6ZMZ3 975 aa15.67■□□□□ 0.1
COL6A2-204ENST00000409416 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
COL6A2-204ENST00000409416 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 ATP2B3Q16720 1220 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 GREM2Q9H772 168 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 CBX8Q9HC52 389 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 KIF3AQ9Y496 699 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 NALCNQ8IZF0 1738 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 TOPAZ1Q8N9V7 1692 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 MRVI1Q9Y6F6 885 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 SMC2O95347 1197 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 TDO2P48775 406 aa15.66■□□□□ 0.1
COL6A2-204ENST00000409416 PES1O00541 588 aaKnown RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 ITGA6P23229 1130 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 TERF1P54274 439 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 AIDAQ96BJ3 306 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 MAP7D2Q96T17 732 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 SEC31BQ9NQW1 1179 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 B4E1Z4 1266 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 IGSF3O75054 1194 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 STARD3NLO95772 234 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 HMGN5P82970 282 aaKnown RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 FSIP1Q8NA03 581 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 PLBD2Q8NHP8 589 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 BAZ2BQ9UIF8 2168 aaKnown RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 USP42Q9H9J4 1324 aaKnown RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 EXOC5O00471 708 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 CTDSPL2Q05D32 466 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 KCNF1Q9H3M0 494 aa15.65■□□□□ 0.1
COL6A2-204ENST00000409416 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
COL6A2-204ENST00000409416 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 NPHP4O75161 1426 aaPredicted RBP15.64■□□□□ 0.09
COL6A2-204ENST00000409416 EYA2O00167 538 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 ZNF213O14771 459 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 BRINP3Q76B58 766 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 CCAR1Q8IX12 1150 aaKnown RBP15.64■□□□□ 0.09
COL6A2-204ENST00000409416 M0R2C6 588 aa15.64■□□□□ 0.09
COL6A2-204ENST00000409416 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
COL6A2-204ENST00000409416 UBE2Q2LH0YL09 131 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 PAXIP1Q6ZW49 1069 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-204ENST00000409416 ANKARQ7Z5J8 1434 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 OSBP2Q969R2 916 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-204ENST00000409416 RIOK3O14730 519 aaKnown RBP15.63■□□□□ 0.09
COL6A2-204ENST00000409416 PRC1O43663 620 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 KRT32Q14532 448 aa15.63■□□□□ 0.09
COL6A2-204ENST00000409416 TPD52L1Q16890 204 aaPredicted RBP15.63■□□□□ 0.09
COL6A2-204ENST00000409416 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 SCRN1Q12765 414 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 IMMTQ16891 758 aaKnown RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 PIGBQ92521 554 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 C8orf76Q96K31 380 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 PUS7LQ9H0K6 701 aaKnown RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 HMG20BQ9P0W2 317 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 VGLL3A8MV65 326 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 CDK11BP21127 795 aaKnown RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 PGBD1Q96JS3 809 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 ARMT1Q9H993 441 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 PPP4R3BQ5MIZ7 849 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 RASSF8Q8NHQ8 419 aa15.62■□□□□ 0.09
COL6A2-204ENST00000409416 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
COL6A2-204ENST00000409416 PHKA1P46020 1223 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 CCAR2Q8N163 923 aaKnown RBP15.61■□□□□ 0.09
COL6A2-204ENST00000409416 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms