RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 XDHP47989 1333 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 G3V3G9 751 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 SASH1O94885 1247 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 PRKG1Q13976 671 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 DCAF8Q5TAQ9 597 aa15.5■□□□□ 0.07
SPTLC1P3-201ENST00000403408 FKTNO75072 461 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 ATP2B4P23634 1241 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 KLRK1P26718 216 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 LDLRAD1Q5T700 205 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 PODNQ7Z5L7 613 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 ZBED3Q96IU2 234 aaPredicted RBP15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
SPTLC1P3-201ENST00000403408 PDE8AO60658 829 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 CCDC152Q4G0S7 254 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 SPRYD7Q5W111 196 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 SSC5DA1L4H1 1573 aa15.48■□□□□ 0.07
SPTLC1P3-201ENST00000403408 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
SPTLC1P3-201ENST00000403408 PCDHAC2Q9Y5I4 1007 aa15.47■□□□□ 0.07
SPTLC1P3-201ENST00000403408 MED23Q9ULK4 1368 aa15.47■□□□□ 0.07
SPTLC1P3-201ENST00000403408 AOX1Q06278 1338 aa15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 OTOP1Q7RTM1 612 aa15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 CCDC191Q8NCU4 936 aa15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 GREM2Q9H772 168 aa15.46■□□□□ 0.07
SPTLC1P3-201ENST00000403408 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1P3-201ENST00000403408 IGKV5-2P06315 115 aa15.45■□□□□ 0.06
SPTLC1P3-201ENST00000403408 TTLL11Q8NHH1 800 aa15.45■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CWC25Q9NXE8 425 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1P3-201ENST00000403408 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
SPTLC1P3-201ENST00000403408 LAMB1P07942 1786 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 GJA5P36382 358 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CTSWP56202 376 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 GOLGA2Q08379 1002 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 SREBF2Q12772 1141 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 STRIP1Q5VSL9 837 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 RUNDC1Q96C34 613 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 MYH3P11055 1940 aa15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 RBBP6Q7Z6E9 1792 aaKnown RBP15.44■□□□□ 0.06
SPTLC1P3-201ENST00000403408 SNAP23O00161 211 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 EN2P19622 333 aaPredicted RBP15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CERS5Q8N5B7 392 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 FBXW7Q969H0 707 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
SPTLC1P3-201ENST00000403408 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
SPTLC1P3-201ENST00000403408 PTPN18Q99952 460 aa15.42■□□□□ 0.06
SPTLC1P3-201ENST00000403408 COA1Q9GZY4 146 aa15.42■□□□□ 0.06
SPTLC1P3-201ENST00000403408 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.42■□□□□ 0.06
SPTLC1P3-201ENST00000403408 MAP3K11Q16584 847 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 TTLL5Q6EMB2 1281 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CD99L2Q8TCZ2 262 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 WNK4Q96J92 1243 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 DEFB129Q9H1M3 183 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 PTPN22Q9Y2R2 807 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
SPTLC1P3-201ENST00000403408 COL6A3P12111 3177 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 NF2P35240 595 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 GTF2IP78347 998 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 RALBP1Q15311 655 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CDC5LQ99459 802 aaKnown RBP15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
SPTLC1P3-201ENST00000403408 CUL9Q8IWT3 2517 aa15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 HSP90B1P14625 803 aaKnown RBP15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CRHR2Q13324 411 aa15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 APOBEC3FQ8IUX4 373 aaKnown RBP15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ARMC5Q96C12 935 aa15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 SLC10A4Q96EP9 437 aa15.39■□□□□ 0.05
SPTLC1P3-201ENST00000403408 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 NBPF12Q5TAG4 269 aaPredicted RBP15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 OTOFQ9HC10 1997 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms