RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 HELBQ8NG08 1087 aaPredicted RBP18.21■□□□□ 0.51
MBD1-209ENST00000398495 NEK1Q96PY6 1258 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 CASZ1Q86V15 1759 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
MBD1-209ENST00000398495 SYT1P21579 422 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 NCLP19338 710 aaKnown RBP18.2■□□□□ 0.5
MBD1-209ENST00000398495 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
MBD1-209ENST00000398495 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
MBD1-209ENST00000398495 USP21Q9UK80 565 aa18.2■□□□□ 0.5
MBD1-209ENST00000398495 MYO5AQ9Y4I1 1855 aaKnown RBP18.2■□□□□ 0.5
MBD1-209ENST00000398495 MROH5Q6ZUA9 1318 aa18.2■□□□□ 0.5
MBD1-209ENST00000398495 STX6O43752 255 aa18.2■□□□□ 0.5
MBD1-209ENST00000398495 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
MBD1-209ENST00000398495 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
MBD1-209ENST00000398495 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■■■■■ 29.9
MBD1-209ENST00000398495 FGFR2P21802 821 aa18.19■□□□□ 0.5
MBD1-209ENST00000398495 PHKA1P46020 1223 aa18.19■□□□□ 0.5
MBD1-209ENST00000398495 PUM3Q15397 648 aaKnown RBP18.19■□□□□ 0.5
MBD1-209ENST00000398495 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
MBD1-209ENST00000398495 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
MBD1-209ENST00000398495 ZNF512BQ96KM6 892 aaPredicted RBP18.19■□□□□ 0.5
MBD1-209ENST00000398495 ZFYP08048 801 aaPredicted RBP18.18■□□□□ 0.5
MBD1-209ENST00000398495 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
MBD1-209ENST00000398495 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
MBD1-209ENST00000398495 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 CNTNAP4Q9C0A0 1308 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 FOXP2O15409 715 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
MBD1-209ENST00000398495 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
MBD1-209ENST00000398495 STK3Q13188 491 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 Q6ZUG5 572 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 LPIN2Q92539 896 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 APPBP2Q92624 585 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
MBD1-209ENST00000398495 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
MBD1-209ENST00000398495 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
MBD1-209ENST00000398495 SNAP23O00161 211 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
MBD1-209ENST00000398495 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
MBD1-209ENST00000398495 A0A1B0GUL6 1792 aa18.16■□□□□ 0.5
MBD1-209ENST00000398495 F13A1P00488 732 aa18.16■□□□□ 0.5
MBD1-209ENST00000398495 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
MBD1-209ENST00000398495 PUS7LQ9H0K6 701 aaKnown RBP18.16■□□□□ 0.5
MBD1-209ENST00000398495 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
MBD1-209ENST00000398495 TCHHQ07283 1943 aa18.16■□□□□ 0.5
MBD1-209ENST00000398495 E7EWF7 191 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 SLC5A1P13866 664 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 MRE11P49959 708 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 CLEC4GQ6UXB4 293 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 C3orf67Q6ZVT6 689 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
MBD1-209ENST00000398495 ATRNO75882 1429 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 DOCK2Q92608 1830 aa18.15■□□□□ 0.5
MBD1-209ENST00000398495 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 ADD2P35612 726 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.497e-7■■■■□ 23.2
MBD1-209ENST00000398495 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
MBD1-209ENST00000398495 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 BRF1Q92994 677 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 BCL2L12Q9HB09 334 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.49
MBD1-209ENST00000398495 TAF1P21675 1872 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 GPAA1O43292 621 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 DHX32Q7L7V1 743 aaKnown RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 GTF3C6Q969F1 213 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 SBF2Q86WG5 1849 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 GADD45BO75293 160 aaPredicted RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 HMGB1P09429 215 aaKnown RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
MBD1-209ENST00000398495 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
MBD1-209ENST00000398495 LY75O60449 1722 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 IDH1O75874 414 aaKnown RBP18.12■□□□□ 0.49
MBD1-209ENST00000398495 SLC9C2Q5TAH2 1124 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 TBC1D9BQ66K14 1250 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 TMEM63CQ9P1W3 806 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
MBD1-209ENST00000398495 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
MBD1-209ENST00000398495 MBD3O95983 291 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 ZNF445P59923 1031 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 HAND2P61296 217 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 RASGRF1Q13972 1273 aa18.11■□□□□ 0.49
MBD1-209ENST00000398495 TMEM87AQ8NBN3 555 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms