RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PGBD1Q96JS3 809 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 DLC1Q96QB1 1528 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 CTDSPL2Q05D32 466 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 ZNF771Q7L3S4 317 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 CCAR2Q8N163 923 aaKnown RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 M0R2C6 588 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 STX1AQ16623 288 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 SLC9C2Q5TAH2 1124 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 FAM177A1Q8N128 213 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-202ENST00000398417 ZKSCAN3Q9BRR0 538 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 ERICH2A1L162 156 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 DYNC1I1O14576 645 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 ADORA1P30542 326 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 OLFM4Q6UX06 510 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 SLC26A6Q9BXS9 759 aa5.74□□□□□ -1.49
SMAD4-202ENST00000398417 G3V3G9 751 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 SPECC1Q5M775 1068 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 DCAF8Q5TAQ9 597 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ZSCAN25Q6NSZ9 544 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 STOX1Q6ZVD7 989 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 TMEM87AQ8NBN3 555 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 CPLX3Q8WVH0 158 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ALG1Q9BT22 464 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ZSCAN16Q9H4T2 348 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 CLIC4Q9Y696 253 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NUTM2BA6NNL0 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NUTM2EB1AL46 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ECM2O94769 699 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 RFX5P48382 616 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ARID5BQ14865 1188 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NUTM2AQ8IVF1 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 PRIMPOLQ96LW4 560 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 PIAS4Q8N2W9 510 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 OSBP2Q969R2 916 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 B4E1Z4 1266 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 IRS4O14654 1257 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 IFIT3O14879 490 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 KIF20AO95235 890 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 GTF3C6Q969F1 213 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 GOLPH3LQ9H4A5 285 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 MAST3O60307 1309 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 DHX16O60231 1041 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 HSPD1P10809 573 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 SKILP12757 684 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 PDIA3P30101 505 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 RASSF8Q8NHQ8 419 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NAT10Q9H0A0 1025 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ARMT1Q9H993 441 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 MYO5CQ9NQX4 1742 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 SLC3A2P08195 630 aaKnown RBP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 SAFBQ15424 915 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 CEP135Q66GS9 1140 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 MICU3Q86XE3 530 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 MNS1Q8NEH6 495 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 ACSBG1Q96GR2 724 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 HAUS7Q99871 368 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NEURL4Q96JN8 1562 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 NR1I2O75469 434 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 TDO2P48775 406 aa5.73□□□□□ -1.49
SMAD4-202ENST00000398417 METAP2P50579 478 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMAD4-202ENST00000398417 IARSP41252 1262 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 IQGAP1P46940 1657 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SSRP1Q08945 709 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 PTPN14Q15678 1187 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 GJB4Q9NTQ9 266 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 MINDY4BA8MYZ0 360 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 IL2RBP14784 551 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 GOLGA8FQ08AF8 430 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 GOLGA8DPQ0D2H9 430 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 TMEM67Q5HYA8 995 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 MIGA1Q8NAN2 632 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 MYRIPQ8NFW9 859 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 DSCC1Q9BVC3 393 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 PIH1D3Q9NQM4 214 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SPTLC2O15270 562 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 ITGA6P23229 1130 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 TCIRG1Q13488 830 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SYNE4Q8N205 404 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SLC4A8Q2Y0W8 1093 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 ZMYM1Q5SVZ6 1142 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 KCNF1Q9H3M0 494 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 IFNKQ9P0W0 207 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 ERBB3P21860 1342 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 USP42Q9H9J4 1324 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 NBPF26B4DH59 902 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 CTAGE5O15320 804 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 NBPF14Q5TI25 921 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 KRT40Q6A162 431 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 NBPF10Q6P3W6 841 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 NBPF15Q8N660 670 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 BCL2L12Q9HB09 334 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 STARD3NLO95772 234 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 SYT10Q6XYQ8 523 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 PUS7LQ9H0K6 701 aaKnown RBP5.72□□□□□ -1.49
SMAD4-202ENST00000398417 PCDHA7Q9UN72 937 aa5.72□□□□□ -1.49
SMAD4-202ENST00000398417 CEMIPQ8WUJ3 1361 aa5.71□□□□□ -1.49
SMAD4-202ENST00000398417 SMTNL1A8MU46 457 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms