RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 SMARCC1Q92922 1105 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 CNPY3Q9BT09 278 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 FSD1Q9BTV5 496 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 VPS18Q9P253 973 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CDC42EP1Q00587 391 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 RALYLQ86SE5 291 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 CCDC51Q96ER9 411 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 TBC1D7Q9P0N9 293 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 ZNF711Q9Y462 761 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 BZW2Q9Y6E2 419 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 SKAP2O75563 359 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 PSMA4P25789 261 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 ZBTB10Q96DT7 871 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 NBPF6Q5VWK0 638 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 LARP1Q6PKG0 1096 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 NBPF5PQ86XG9 351 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 NBPF4Q96M43 638 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 YY1AP1Q9H869 796 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEB-203ENST00000397345 SNW1Q13573 536 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 MAATS1Q7Z4T9 603 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 LCA5Q86VQ0 697 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 KLHL23Q8NBE8 558 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 SDF4Q9BRK5 362 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 MYRIPQ8NFW9 859 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 MICAL1Q8TDZ2 1067 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 L3MBTL2Q969R5 705 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 TBC1D2Q9BYX2 928 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 C9orf78Q9NZ63 289 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEB-203ENST00000397345 SMARCA5O60264 1052 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 MXRA7P84157 204 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 NCBP1Q09161 790 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 ACBD5Q5T8D3 534 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 SAMD3Q8N6K7 520 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 TCP11L1Q9NUJ3 509 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 MIS18AQ9NYP9 233 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 RAD21O60216 631 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 SEPT7Q16181 437 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 ZSCAN26Q16670 478 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 SMC1BQ8NDV3 1235 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 VEZTQ9HBM0 779 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 FYCO1Q9BQS8 1478 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 H0YCG3 227 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 SNRPFP62306 86 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 SMC5Q8IY18 1101 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 FERMT2Q96AC1 680 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 BCL2L12Q9HB09 334 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 PARP2Q9UGN5 583 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CCDC160A6NGH7 325 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CCDC96Q2M329 555 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 ARHGEF10O15013 1369 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 BZW1Q7L1Q6 419 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 MIPOL1Q8TD10 442 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 GINM1Q9NU53 330 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CYP46A1Q9Y6A2 500 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CARMIL3Q8ND23 1372 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 FSD2A1L4K1 749 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 PSDA5PKW4 1024 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 LAD1O00515 517 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 PPIP5K1Q6PFW1 1433 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 K7ELQ4 463 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 SRRM1Q8IYB3 904 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 CCDC150Q8NCX0 1101 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 PPP1R2P1Q96PQ5 205 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 CARD10Q9BWT7 1032 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 NUTM2FA1L443 756 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 NBPF20Q3BBV1 942 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 RTEL1-TNFRSF6BF6WH68 1400 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 VPS37CA5D8V6 355 aaPredicted RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 HNRNPCL1O60812 293 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 MAN1A1P33908 653 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 RPL22P35268 128 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 CFAP58Q5T655 872 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 DIS3Q9Y2L1 958 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 TTC36A6NLP5 189 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 PFDN6O15212 129 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 MARCH6O60337 910 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 SEPT2Q15019 361 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 GBP5Q96PP8 586 aa2.87□□□□□ -1.95
NEB-203ENST00000397345 DDX41Q9UJV9 622 aaKnown RBP2.87□□□□□ -1.95
NEB-203ENST00000397345 KIF5CO60282 957 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 SNUPNO95149 360 aaKnown RBP2.86□□□□□ -1.95
NEB-203ENST00000397345 ATP5BP06576 529 aaKnown RBP2.86□□□□□ -1.95
NEB-203ENST00000397345 DMPKQ09013 629 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 TNIP1Q15025 636 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 NFE2L2Q16236 605 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 ITPRIPQ8IWB1 547 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 ERMNQ8TAM6 284 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 SNRNP27Q8WVK2 155 aaKnown RBP2.86□□□□□ -1.95
NEB-203ENST00000397345 SGSM3Q96HU1 749 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 MCM9Q9NXL9 1143 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 RABL2AQ9UBK7 228 aaPredicted RBP2.86□□□□□ -1.95
NEB-203ENST00000397345 ZMYM2Q9UBW7 1377 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 POGZQ7Z3K3 1410 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 WAPLQ7Z5K2 1190 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 PPFIBP2Q8ND30 876 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 TAF4BQ92750 862 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 PCP4L1A6NKN8 68 aa2.86□□□□□ -1.95
NEB-203ENST00000397345 HGSO14964 777 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms