RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SLC27A2O14975 620 aa17.97■□□□□ 0.47
CCT4-201ENST00000394440 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
CCT4-201ENST00000394440 CCDC129Q6ZRS4 1044 aa17.97■□□□□ 0.47
CCT4-201ENST00000394440 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
CCT4-201ENST00000394440 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
CCT4-201ENST00000394440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
CCT4-201ENST00000394440 SLC5A1P13866 664 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 PHKA1P46020 1223 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 CHRNDQ07001 517 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
CCT4-201ENST00000394440 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
CCT4-201ENST00000394440 CUL4AQ13619 759 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 TSGA10IPQ3SY00 556 aa17.96■□□□□ 0.47
CCT4-201ENST00000394440 MAST3O60307 1309 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 UQCRFS1P1P0C7P4 283 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 ZKSCAN1P17029 563 aaPredicted RBP17.95■□□□□ 0.46
CCT4-201ENST00000394440 ANKRD18AQ8IVF6 992 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 PROM2Q8N271 834 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 ZSWIM6Q9HCJ5 1215 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 HMG20BQ9P0W2 317 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
CCT4-201ENST00000394440 SNAP23O00161 211 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
CCT4-201ENST00000394440 NFIXQ14938 502 aa17.95■□□□□ 0.46
CCT4-201ENST00000394440 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
CCT4-201ENST00000394440 LAMA4Q16363 1823 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 KCNJ4P48050 445 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 LRRFIP1Q32MZ4 808 aaKnown RBP17.94■□□□□ 0.46
CCT4-201ENST00000394440 NLRP3Q96P20 1036 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
CCT4-201ENST00000394440 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
CCT4-201ENST00000394440 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
CCT4-201ENST00000394440 RGPD3A6NKT7 1758 aaPredicted RBP17.93■□□□□ 0.46
CCT4-201ENST00000394440 RGPD4Q7Z3J3 1758 aa17.93■□□□□ 0.46
CCT4-201ENST00000394440 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
CCT4-201ENST00000394440 CELF1Q92879 486 aaKnown RBP17.93■□□□□ 0.46
CCT4-201ENST00000394440 DSCC1Q9BVC3 393 aa17.93■□□□□ 0.46
CCT4-201ENST00000394440 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
CCT4-201ENST00000394440 GYS1P13807 737 aa17.93■□□□□ 0.46
CCT4-201ENST00000394440 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
CCT4-201ENST00000394440 TAF6LQ9Y6J9 622 aa17.93■□□□□ 0.46
CCT4-201ENST00000394440 TTF1Q15361 905 aaPredicted RBP17.92■□□□□ 0.46
CCT4-201ENST00000394440 ZGPATQ8N5A5 531 aaKnown RBP17.92■□□□□ 0.46
CCT4-201ENST00000394440 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
CCT4-201ENST00000394440 M0R2C6 588 aa17.92■□□□□ 0.46
CCT4-201ENST00000394440 PLSCR1O15162 318 aa17.92■□□□□ 0.46
CCT4-201ENST00000394440 TM4SF1P30408 202 aa17.92■□□□□ 0.46
CCT4-201ENST00000394440 AK2P54819 239 aa17.92■□□□□ 0.46
CCT4-201ENST00000394440 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
CCT4-201ENST00000394440 CPA1P15085 419 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 DEFB132Q7Z7B7 95 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 APPBP2Q92624 585 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
CCT4-201ENST00000394440 MINPP1Q9UNW1 487 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
CCT4-201ENST00000394440 RASGRF1Q13972 1273 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
CCT4-201ENST00000394440 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
CCT4-201ENST00000394440 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 ZNF804BA4D1E1 1349 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 CYP21A2P08686 494 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 HSPD1P10809 573 aaKnown RBP17.9■□□□□ 0.46
CCT4-201ENST00000394440 PSMA5P28066 241 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 ADD2P35612 726 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 COL9A3Q14050 684 aaPredicted RBP17.9■□□□□ 0.46
CCT4-201ENST00000394440 SPATA5Q8NB90 893 aa17.9■□□□□ 0.46
CCT4-201ENST00000394440 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.45
CCT4-201ENST00000394440 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
CCT4-201ENST00000394440 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCT4-201ENST00000394440 FOXP2O15409 715 aa17.89■□□□□ 0.45
CCT4-201ENST00000394440 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
CCT4-201ENST00000394440 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
CCT4-201ENST00000394440 TNPO1Q92973 898 aaKnown RBP17.89■□□□□ 0.45
CCT4-201ENST00000394440 BCAMP50895 628 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 KRT32Q14532 448 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 PRR5LQ6MZQ0 368 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 ZSCAN25Q6NSZ9 544 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 PUS7LQ9H0K6 701 aaKnown RBP17.88■□□□□ 0.45
CCT4-201ENST00000394440 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 UBE3CQ15386 1083 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 ALDH8A1Q9H2A2 487 aaPredicted RBP17.88■□□□□ 0.45
CCT4-201ENST00000394440 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
CCT4-201ENST00000394440 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
CCT4-201ENST00000394440 MCM4P33991 863 aa17.87■□□□□ 0.45
CCT4-201ENST00000394440 BAG6P46379 1132 aa17.87■□□□□ 0.45
CCT4-201ENST00000394440 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
CCT4-201ENST00000394440 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
CCT4-201ENST00000394440 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 NUCB2P80303 420 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 SLC9C2Q5TAH2 1124 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms