RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■■■□□ 15.7
ACTN1-203ENST00000394419 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-203ENST00000394419 HSP90AA4PQ58FG1 418 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
ACTN1-203ENST00000394419 CTNNA3Q9UI47 895 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 ADGRL3Q9HAR2 1447 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 ZAP70P43403 619 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 ZNF75DP51815 510 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 TERF1P54274 439 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 RESTQ13127 1097 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 XAGE2Q96GT9 111 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 FMN2Q9NZ56 1722 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 ZNF609O15014 1411 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-203ENST00000394419 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 STX1AQ16623 288 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 CPLX2Q6PUV4 134 aaKnown RBP12.31□□□□□ -0.44
ACTN1-203ENST00000394419 CCDC112Q8NEF3 446 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 KIAA1524Q8TCG1 905 aa12.31□□□□□ -0.44
ACTN1-203ENST00000394419 DHX16O60231 1041 aaKnown RBP12.3□□□□□ -0.44
ACTN1-203ENST00000394419 SLC9C2Q5TAH2 1124 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-203ENST00000394419 MTERF4Q7Z6M4 381 aaKnown RBP12.3□□□□□ -0.44
ACTN1-203ENST00000394419 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
ACTN1-203ENST00000394419 ANO10Q9NW15 660 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 MAST3O60307 1309 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 NWD1Q149M9 1564 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 M0R2C6 588 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 NRDCO43847 1150 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 TRIM29Q14134 588 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 ARHGAP23Q9P227 1491 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
ACTN1-203ENST00000394419 TPM4P67936 248 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
ACTN1-203ENST00000394419 ELP1O95163 1332 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 PFKFB2O60825 505 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 IGSF3O75054 1194 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 KCNB2Q92953 911 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
ACTN1-203ENST00000394419 SKILP12757 684 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 UTYO14607 1347 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 SLIT1O75093 1534 aa12.29□□□□□ -0.44
ACTN1-203ENST00000394419 XRN1Q8IZH2 1706 aaKnown RBP12.29□□□□□ -0.44
ACTN1-203ENST00000394419 FGAP02671 866 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 PDE4CQ08493 712 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.28□□□□□ -0.445e-6■■■■■ 34.6
ACTN1-203ENST00000394419 FAM208AQ9UK61 1670 aaKnown RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 ATG9AQ7Z3C6 839 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 NCOA7Q8NI08 942 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 CACTINQ8WUQ7 758 aaKnown RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 IQSEC3Q9UPP2 1182 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-203ENST00000394419 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 FOXO4P98177 505 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 CCDC191Q8NCU4 936 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 PHKBQ93100 1093 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 COL15A1P39059 1388 aa12.28□□□□□ -0.44
ACTN1-203ENST00000394419 NCAPD2Q15021 1401 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 GPAA1O43292 621 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 SLC3A2P08195 630 aaKnown RBP12.27□□□□□ -0.44
ACTN1-203ENST00000394419 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.44
ACTN1-203ENST00000394419 AIDAQ96BJ3 306 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 GOLPH3LQ9H4A5 285 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 CACNA1FO60840 1977 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 TMEM94Q12767 1356 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 NALCNQ8IZF0 1738 aa12.27□□□□□ -0.44
ACTN1-203ENST00000394419 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
ACTN1-203ENST00000394419 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 SCARF1Q14162 830 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 PTPN14Q15678 1187 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 TMC6Q7Z403 805 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 NUP133Q8WUM0 1156 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 PUS7LQ9H0K6 701 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms