RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
NUP58-204ENST00000394327 SLC52A2Q9HAB3 445 aa8.12□□□□□ -1.11
NUP58-204ENST00000394327 LGR6Q9HBX8 967 aa8.12□□□□□ -1.11
NUP58-204ENST00000394327 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
NUP58-204ENST00000394327 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
NUP58-204ENST00000394327 C5P01031 1676 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
NUP58-204ENST00000394327 J3QL48 77 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 HDGFL1Q5TGJ6 251 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 PHTF2Q8N3S3 785 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 THUMPD2Q9BTF0 503 aaKnown RBP8.11□□□□□ -1.11
NUP58-204ENST00000394327 PCDHB9Q9Y5E1 797 aa8.11□□□□□ -1.11
NUP58-204ENST00000394327 SENP3-EIF4A1A0A087X0R7 540 aa8.1□□□□□ -1.11
NUP58-204ENST00000394327 BTBD11A6QL63 1104 aa8.1□□□□□ -1.11
NUP58-204ENST00000394327 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
NUP58-204ENST00000394327 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
NUP58-204ENST00000394327 GLMNQ92990 594 aa8.1□□□□□ -1.11
NUP58-204ENST00000394327 CHL1O00533 1208 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 ZNF853P0CG23 659 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
NUP58-204ENST00000394327 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 TSPYL4Q9UJ04 414 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 TJP1Q07157 1748 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
NUP58-204ENST00000394327 SOS1Q07889 1333 aaPredicted RBP8.08□□□□□ -1.12
NUP58-204ENST00000394327 ESPNB1AK53 854 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 NR3C2P08235 984 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 SMPD1P17405 629 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 PRR20EP86478 221 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 PRR20CP86479 221 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 PRR20DP86480 221 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 PRR20BP86481 221 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 PRR20AP86496 221 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 MPNDQ8N594 471 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 SMARCC1Q92922 1105 aaPredicted RBP8.08□□□□□ -1.12
NUP58-204ENST00000394327 ACSBG1Q96GR2 724 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 MBIPQ9NS73 344 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
NUP58-204ENST00000394327 FANCIQ9NVI1 1328 aa8.08□□□□□ -1.12
NUP58-204ENST00000394327 GFRA3O60609 400 aa8.07□□□□□ -1.12
NUP58-204ENST00000394327 CT47B1P0C2W7 299 aaPredicted RBP8.07□□□□□ -1.12
NUP58-204ENST00000394327 HMGB2P26583 209 aaKnown RBP8.07□□□□□ -1.12
NUP58-204ENST00000394327 ZNF790Q6PG37 636 aa8.07□□□□□ -1.12
NUP58-204ENST00000394327 DZIP3Q86Y13 1208 aaKnown RBP8.07□□□□□ -1.12
NUP58-204ENST00000394327 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
NUP58-204ENST00000394327 PIGBQ92521 554 aa8.07□□□□□ -1.12
NUP58-204ENST00000394327 CHMP4AQ9BY43 222 aa8.07□□□□□ -1.12
NUP58-204ENST00000394327 RREB1Q92766 1687 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 HOXB7P09629 217 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
NUP58-204ENST00000394327 CCDC85AQ96PX6 553 aaPredicted RBP8.06□□□□□ -1.12
NUP58-204ENST00000394327 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 KCTD15Q96SI1 283 aaPredicted RBP8.06□□□□□ -1.12
NUP58-204ENST00000394327 MAP4K5Q9Y4K4 846 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 MYH14Q7Z406 1995 aaKnown RBP8.06□□□□□ -1.12
NUP58-204ENST00000394327 PALLDQ8WX93 1383 aa8.06□□□□□ -1.12
NUP58-204ENST00000394327 QSER1Q2KHR3 1735 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 KCNQ2O43526 872 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 ALDH1A1P00352 501 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 EIF4A1P60842 406 aaKnown RBP8.05□□□□□ -1.12
NUP58-204ENST00000394327 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
NUP58-204ENST00000394327 TSR2Q969E8 191 aaKnown RBP8.05□□□□□ -1.12
NUP58-204ENST00000394327 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 SLC10A4Q96EP9 437 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 MIS18AQ9NYP9 233 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 PDZRN3Q9UPQ7 1066 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 HEG1Q9ULI3 1381 aa8.05□□□□□ -1.12
NUP58-204ENST00000394327 TRIM37O94972 964 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
NUP58-204ENST00000394327 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
NUP58-204ENST00000394327 TEX13AQ9BXU3 409 aaPredicted RBP8.04□□□□□ -1.12
NUP58-204ENST00000394327 ASAP1Q9ULH1 1129 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 UBR3Q6ZT12 1888 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 C4BP0C0L5 1744 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 N4BP2Q86UW6 1770 aaPredicted RBP8.04□□□□□ -1.12
NUP58-204ENST00000394327 NUP188Q5SRE5 1749 aa8.04□□□□□ -1.12
NUP58-204ENST00000394327 ADH1CP00326 375 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 FSHRP23945 695 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 EXOSC9Q06265 439 aaKnown RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 CYP4X1Q8N118 509 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 HPS1Q92902 700 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 ZNF496Q96IT1 587 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms