RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PBX4Q9BYU1 374 aa4.53□□□□□ -1.68
TRAJ40-201ENST00000390497 BHLHE41Q9C0J9 482 aaPredicted RBP4.53□□□□□ -1.68
TRAJ40-201ENST00000390497 NSFL1CQ9UNZ2 370 aaKnown RBP4.53□□□□□ -1.68
TRAJ40-201ENST00000390497 SAMM50Q9Y512 469 aa4.53□□□□□ -1.68
TRAJ40-201ENST00000390497 A0A096LPE4 126 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 A0A1W2PPZ6 126 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 FAM177BA6PVY3 158 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 SOBPA7XYQ1 873 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 PDE2AO00408 941 aaPredicted RBP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 SMNDC1O75940 238 aaKnown RBP eCLIP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 GJA8P48165 433 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 RBL2Q08999 1139 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 ZNF468Q5VIY5 522 aaPredicted RBP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 MICALL1Q8N3F8 863 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 SEC16BQ96JE7 1060 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 TMEM74Q96NL1 305 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 HIRIP3Q9BW71 556 aaPredicted RBP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 IRX2Q9BZI1 471 aaPredicted RBP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 ABCB6Q9NP58 842 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 LATS2Q9NRM7 1088 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 CUEDC1Q9NWM3 386 aaPredicted RBP4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 DACH1Q9UI36 760 aa4.52□□□□□ -1.69
TRAJ40-201ENST00000390497 NFKBIEO00221 500 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 PPFIA3O75145 1194 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 BMP4P12644 408 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 GBP2P32456 591 aaPredicted RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 RPS26P62854 115 aaKnown RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 CTBSQ01459 385 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 PPP2R3AQ06190 1150 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 COL9A2Q14055 689 aaPredicted RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 COL13A1Q5TAT6 717 aaPredicted RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 SYT9Q86SS6 491 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 DDX54Q8TDD1 881 aaKnown RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 RASGRP4Q8TDF6 673 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 BSNDQ8WZ55 320 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 SPON2Q9BUD6 331 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 UBE2OQ9C0C9 1292 aaKnown RBP4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 KBTBD4Q9NVX7 518 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 ROBO2Q9HCK4 1378 aa4.51□□□□□ -1.69
TRAJ40-201ENST00000390497 ADARB2-AS1A8MUL3 147 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 ZBTB42B2RXF5 422 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 C11orf95C9JLR9 678 aaPredicted RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 ATF4P18848 351 aaPredicted RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 LMNB1P20700 586 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 ALAS2P22557 587 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 DNAJA1P31689 397 aaKnown RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 EIF4A3P38919 411 aaKnown RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 MAP2K3P46734 347 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 PAK2Q13177 524 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 SCARA3Q6AZY7 606 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 CCDC84Q86UT8 332 aaPredicted RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 KIAA0825Q8IV33 1275 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 NPAS3Q8IXF0 933 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 VWA5B2Q8N398 1253 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 TTC9Q92623 222 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 TNFRSF25Q93038 417 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 GPRASP2Q96D09 838 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 NSUN5Q96P11 429 aaKnown RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 NT5C1AQ9BXI3 368 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 IGFLR1Q9H665 355 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 TMEM39AQ9NV64 488 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 DNAJB12Q9NXW2 375 aaKnown RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 FRRS1LQ9P0K9 344 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 GMPR2Q9P2T1 348 aaKnown RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 CYP8B1Q9UNU6 501 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 PCDHGB7Q9Y5F8 929 aa4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.5□□□□□ -1.69
TRAJ40-201ENST00000390497 CDC14CA4D256 554 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 MINDY4BA8MYZ0 360 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 J3QW42 95 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 ARAFP10398 606 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 MX2P20592 715 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 ADH6P28332 368 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 GTF2F1P35269 517 aaKnown RBP eCLIP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 GRIA4P48058 902 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 TNNI2P48788 182 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 MAP3K10Q02779 954 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 LMNB2Q03252 620 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 GRIN2CQ14957 1233 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 LRRC14Q15048 493 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 CEP135Q66GS9 1140 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 ELMSAN1Q6PJG2 1045 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 ASAP3Q8TDY4 903 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 ZNF296Q8WUU4 475 aaPredicted RBP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 CNTNAP3BQ96NU0 1288 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 NECAB3Q96P71 396 aaPredicted RBP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 POP1Q99575 1024 aaKnown RBP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 CNTNAP3Q9BZ76 1288 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 RASSF4Q9H2L5 321 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 CLEC4MQ9H2X3 399 aaPredicted RBP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 COPRSQ9NQ92 184 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 SEC31BQ9NQW1 1179 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 KCNQ5Q9NR82 932 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 HCN2Q9UL51 889 aa4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 SUPT16HQ9Y5B9 1047 aaKnown RBP4.49□□□□□ -1.69
TRAJ40-201ENST00000390497 PTPRAP18433 802 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 EIF2AK2P19525 551 aaKnown RBP4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 LIG3P49916 1009 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 TTBK2Q6IQ55 1244 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms