RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 BRPF3Q9ULD4 1205 aa4.43□□□□□ -1.7
RNU6-541P-201ENST00000384709 IVNS1ABPQ9Y6Y0 642 aa4.43□□□□□ -1.7
RNU6-541P-201ENST00000384709 GPR182O15218 404 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 EIF2AK2P19525 551 aaKnown RBP4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 TBC1D8BQ0IIM8 1120 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 PEAR1Q5VY43 1037 aaPredicted RBP4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 ADAMTSL4Q6UY14 1074 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 FBXO11Q86XK2 927 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 MAP4K3Q8IVH8 894 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 TMEM102Q8N9M5 508 aaPredicted RBP4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 NSUN5Q96P11 429 aaKnown RBP4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 MUC3BQ9H195 1237 aa4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 FOXD3Q9UJU5 478 aaPredicted RBP4.42□□□□□ -1.7
RNU6-541P-201ENST00000384709 EREGO14944 169 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 PHACTR2O75167 634 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 PDIA4P13667 645 aaKnown RBP4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 ELNP15502 786 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 CES1P23141 567 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 ATP11AP98196 1134 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 TRIM28Q13263 835 aaKnown RBP4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 AAMPQ13685 434 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 TTC16Q8NEE8 873 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 NXPE3Q969Y0 559 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 SPACA7Q96KW9 195 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 BHLHE41Q9C0J9 482 aaPredicted RBP4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 RASSF4Q9H2L5 321 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 AMOTL2Q9Y2J4 779 aa4.41□□□□□ -1.7
RNU6-541P-201ENST00000384709 TREHO43280 583 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 DEAF1O75398 565 aaPredicted RBP4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 SMNDC1O75940 238 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 EDN3P14138 238 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 SELPP16109 830 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 ADGRE1Q14246 886 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 SETDB1Q15047 1291 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 PRRT3Q5FWE3 981 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 TRAPPC3LQ5T215 181 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 KIAA0319Q5VV43 1072 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 CD163Q86VB7 1156 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 WFDC8Q8IUA0 241 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 DMRTC2Q8IXT2 367 aaPredicted RBP4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 LENG1Q96BZ8 264 aaPredicted RBP4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 ASB16Q96NS5 453 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 NACC1Q96RE7 527 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 POP1Q99575 1024 aaKnown RBP4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 KANSL3Q9P2N6 904 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 SOX13Q9UN79 622 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 TRIM33Q9UPN9 1127 aa4.4□□□□□ -1.71
RNU6-541P-201ENST00000384709 C1QTNF9BB2RNN3 333 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 C9orf172C9J069 976 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 DLL1O00548 723 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 CPNE3O75131 537 aaKnown RBP4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 CHRNA4P43681 627 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 RAC1P63000 192 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 FMR1Q06787 632 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 CEP135Q66GS9 1140 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 IGF2-ASQ6U949 168 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 TMC7Q7Z402 723 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 TMEM130Q8N3G9 435 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 DCAF11Q8TEB1 546 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 WNT8BQ93098 351 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 ZKSCAN3Q9BRR0 538 aa4.39□□□□□ -1.71
RNU6-541P-201ENST00000384709 A0A1W2PP55 124 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 PDE2AO00408 941 aaPredicted RBP4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 FURINP09958 794 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 ACPPP15309 386 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 PTPRAP18433 802 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 CDC27P30260 824 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 ORC1Q13415 861 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 COL19A1Q14993 1142 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 SND1Q7KZF4 910 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 CCNJLQ8IV13 435 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 IL22RA1Q8N6P7 574 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 CSRNP1Q96S65 589 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 TCF12Q99081 682 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 OSMRQ99650 979 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 NIF3L1Q9GZT8 377 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 OSGEPQ9NPF4 335 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 PPME1Q9Y570 386 aa4.38□□□□□ -1.71
RNU6-541P-201ENST00000384709 FAM229AH3BQW9 127 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 EIF1AYO14602 144 aaKnown RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 APBA3O96018 575 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 ITPKAP23677 461 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 NRG1Q02297 640 aaPredicted RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 PTPN12Q05209 780 aaKnown RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 GRIK4Q16099 956 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 GDF6Q6KF10 455 aaPredicted RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 PRPF40BQ6NWY9 871 aaKnown RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 KLHL23Q8NBE8 558 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 BSNDQ8WZ55 320 aa4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 SSBP4Q9BWG4 385 aaPredicted RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 SOX17Q9H6I2 414 aaPredicted RBP4.37□□□□□ -1.71
RNU6-541P-201ENST00000384709 H3BRJ5 948 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 EPHA1P21709 976 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 MBTPS1Q14703 1052 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 ENOX2Q16206 610 aaKnown RBP4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 Q6ZS46 218 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 VN1R5Q7Z5H4 357 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 ZSCAN29Q8IWY8 852 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms