RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 ZMYM1Q5SVZ6 1142 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 WNK3Q9BYP7 1800 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
PDX1-201ENST00000381033 CCDC158Q5M9N0 1113 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 ZNF34Q8IZ26 560 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 PLCD3Q8N3E9 789 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 NEK1Q96PY6 1258 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 CDHR2Q9BYE9 1310 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
PDX1-201ENST00000381033 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
PDX1-201ENST00000381033 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
PDX1-201ENST00000381033 ATP2B3Q16720 1220 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 RNF113AO15541 343 aaKnown RBP20.44■□□□□ 0.86
PDX1-201ENST00000381033 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 TSGA10IPQ3SY00 556 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
PDX1-201ENST00000381033 MCAMP43121 646 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 Q6ZUG5 572 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 FAM173BQ6P4H8 233 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 SH2B1Q9NRF2 756 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 MTMR6Q9Y217 621 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
PDX1-201ENST00000381033 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 U3KPZ7 1027 aaPredicted RBP20.43■□□□□ 0.86
PDX1-201ENST00000381033 ERVV-1B6SEH8 477 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 FOXP2O15409 715 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 PDE8AO60658 829 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 ZNF830Q96NB3 372 aaPredicted RBP20.42■□□□□ 0.86
PDX1-201ENST00000381033 PUS7LQ9H0K6 701 aaKnown RBP20.42■□□□□ 0.86
PDX1-201ENST00000381033 SYCE3A1L190 88 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 WASHC4Q2M389 1173 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 VGLL2Q8N8G2 317 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
PDX1-201ENST00000381033 F13A1P00488 732 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 RFX7Q2KHR2 1363 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 JAK2O60674 1132 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 HAND2P61296 217 aa20.41■□□□□ 0.86
PDX1-201ENST00000381033 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
PDX1-201ENST00000381033 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 PHKA1P46020 1223 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 DNM1Q05193 864 aaKnown RBP20.4■□□□□ 0.86
PDX1-201ENST00000381033 BRF1Q92994 677 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 KCNG1Q9UIX4 513 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 FIBPO43427 364 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 CDC37L1Q7L3B6 337 aa20.4■□□□□ 0.86
PDX1-201ENST00000381033 MYH3P11055 1940 aa20.39■□□□□ 0.85
PDX1-201ENST00000381033 PDE8BO95263 885 aa20.38■□□□□ 0.85
PDX1-201ENST00000381033 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 NGLY1Q96IV0 654 aa20.38■□□□□ 0.85
PDX1-201ENST00000381033 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDX1-201ENST00000381033 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 MYO5AQ9Y4I1 1855 aaKnown RBP20.38■□□□□ 0.85
PDX1-201ENST00000381033 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
PDX1-201ENST00000381033 TOM1O60784 492 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 ZNF445P59923 1031 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 RBSNQ9H1K0 784 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 E7EWF7 191 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 DSCC1Q9BVC3 393 aa20.37■□□□□ 0.85
PDX1-201ENST00000381033 UBAP1LF5GYI3 381 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 KRT32Q14532 448 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDX1-201ENST00000381033 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 LAMA4Q16363 1823 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 CCDC102BQ68D86 513 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 PIH1D3Q9NQM4 214 aaKnown RBP20.36■□□□□ 0.85
PDX1-201ENST00000381033 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
PDX1-201ENST00000381033 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 UTP14AQ9BVJ6 771 aaKnown RBP20.35■□□□□ 0.85
PDX1-201ENST00000381033 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 NKX2-3Q8TAU0 364 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 COL4A1P02462 1669 aa20.35■□□□□ 0.85
PDX1-201ENST00000381033 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 FGAP02671 866 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 FOSBP53539 338 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 SCRN1Q12765 414 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 NASPP49321 788 aaPredicted RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 CCT2P78371 535 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
PDX1-201ENST00000381033 NCOA5Q9HCD5 579 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
PDX1-201ENST00000381033 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms