RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 OTUD5Q96G74 571 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 TRIM75PA6NK02 468 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 BACH1O14867 736 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 NCBP1Q09161 790 aaKnown RBP7.65□□□□□ -1.18
NEDD9-202ENST00000379446 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 WDR66Q8TBY9 1149 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 CNOT7Q9UIV1 285 aaKnown RBP7.65□□□□□ -1.18
NEDD9-202ENST00000379446 USP16Q9Y5T5 823 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 SBNO1A3KN83 1393 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 MAP3K5Q99683 1374 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 KDM5AP29375 1690 aaKnown RBP7.65□□□□□ -1.18
NEDD9-202ENST00000379446 TNS3Q68CZ2 1445 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 SASH1O94885 1247 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 EPHX2P34913 555 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 KCTD2Q14681 263 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 KSR2Q6VAB6 950 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 CTNNA3Q9UI47 895 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 ZCCHC11Q5TAX3 1644 aaKnown RBP7.65□□□□□ -1.18
NEDD9-202ENST00000379446 MADDQ8WXG6 1647 aa7.65□□□□□ -1.18
NEDD9-202ENST00000379446 M0QZ92 97 aa7.65□□□□□ -1.19
NEDD9-202ENST00000379446 IL6STP40189 918 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-202ENST00000379446 CBX1P83916 185 aa7.65□□□□□ -1.19
NEDD9-202ENST00000379446 DGKZQ13574 1117 aa7.65□□□□□ -1.19
NEDD9-202ENST00000379446 CT47A1Q5JQC4 288 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-202ENST00000379446 PHACTR3Q96KR7 559 aa7.65□□□□□ -1.19
NEDD9-202ENST00000379446 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-202ENST00000379446 PLXNC1O60486 1568 aa7.65□□□□□ -1.19
NEDD9-202ENST00000379446 ZBED4O75132 1171 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 DDNO94850 711 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 TTF1Q15361 905 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 LRRCC1Q9C099 1032 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 PTPDC1A2A3K4 754 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 ODF2Q5BJF6 829 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 MIGA2Q7L4E1 593 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 AP5M1Q9H0R1 490 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 DDX21Q9NR30 783 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 TRIM17Q9Y577 477 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 NRDCO43847 1150 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 CDC45O75419 566 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 IARSP41252 1262 aaKnown RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 SREBF2Q12772 1141 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 LRSAM1Q6UWE0 723 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 MICALL2Q8IY33 904 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 ANKRD35Q8N283 1001 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 GPR101Q96P66 508 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 KAT14Q9H8E8 782 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 PNMA3Q9UL41 463 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 SMARCA5O60264 1052 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 HDAC1Q13547 482 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 KIF4BQ2VIQ3 1234 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-202ENST00000379446 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
NEDD9-202ENST00000379446 USP17L3A6NCW0 530 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 USP17L4A6NCW7 530 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 HIP1O00291 1037 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 Q3C1V9 767 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 USP17L1Q7RTZ2 530 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 TMC4Q7Z404 712 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 HINFPQ9BQA5 517 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 ZFYVE28Q9HCC9 887 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 NARFQ9UHQ1 456 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 DENND2AQ9ULE3 1009 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 GRM8O00222 908 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 RASSF7Q02833 373 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 TRAF1Q13077 416 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 NFIXQ14938 502 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 IMMTQ16891 758 aaKnown RBP7.63□□□□□ -1.19
NEDD9-202ENST00000379446 ZNF771Q7L3S4 317 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-202ENST00000379446 PLBD2Q8NHP8 589 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 TNPO1Q92973 898 aaKnown RBP7.63□□□□□ -1.19
NEDD9-202ENST00000379446 ZBTB40Q9NUA8 1239 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 PPP4R3BQ5MIZ7 849 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 TTLL7Q6ZT98 887 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 GCC1Q96CN9 775 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 BRIP1Q9BX63 1249 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
NEDD9-202ENST00000379446 NUCB1Q02818 461 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 KRT24Q2M2I5 525 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 TBC1D9Q6ZT07 1266 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 BARGINQ6ZT62 677 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 RNF41Q9H4P4 317 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 MBIPQ9NS73 344 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 PKD2L1Q9P0L9 805 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 SLC4A4Q9Y6R1 1079 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 VGLL3A8MV65 326 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 GOLGA6L6A8MZA4 724 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 CAVIN1Q6NZI2 390 aaKnown RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 K7ELQ4 463 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 REC8O95072 547 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 EPS15P42566 896 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 SMC5Q8IY18 1101 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 CSRNP1Q96S65 589 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms