RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZMYM1Q5SVZ6 1142 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 CCDC102BQ68D86 513 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
SSU72-204ENST00000378726 SNAP23O00161 211 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
SSU72-204ENST00000378726 LRRFIP1Q32MZ4 808 aaKnown RBP23.23■■□□□ 1.31
SSU72-204ENST00000378726 SLC27A3Q5K4L6 730 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 RNF20Q5VTR2 975 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 PI16Q6UXB8 463 aa23.23■■□□□ 1.31
SSU72-204ENST00000378726 TAF1LQ8IZX4 1826 aa23.22■■□□□ 1.31
SSU72-204ENST00000378726 SLC5A1P13866 664 aa23.22■■□□□ 1.31
SSU72-204ENST00000378726 JAKMIP1Q96N16 626 aaKnown RBP23.22■■□□□ 1.31
SSU72-204ENST00000378726 NLRP3Q96P20 1036 aa23.22■■□□□ 1.31
SSU72-204ENST00000378726 TM6SF1Q9BZW5 370 aa23.22■■□□□ 1.31
SSU72-204ENST00000378726 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 PTMSP20962 102 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 PHKA1P46020 1223 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 ANKRD18AQ8IVF6 992 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 CHRNDQ07001 517 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 TTC14Q96N46 770 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 ZSWIM6Q9HCJ5 1215 aa23.21■■□□□ 1.31
SSU72-204ENST00000378726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.2■■□□□ 1.3
SSU72-204ENST00000378726 UQCRFS1P1P0C7P4 283 aa23.2■■□□□ 1.3
SSU72-204ENST00000378726 CPA1P15085 419 aa23.2■■□□□ 1.3
SSU72-204ENST00000378726 ADRA2BP18089 450 aa23.2■■□□□ 1.3
SSU72-204ENST00000378726 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
SSU72-204ENST00000378726 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
SSU72-204ENST00000378726 LRP5O75197 1615 aa23.2■■□□□ 1.3
SSU72-204ENST00000378726 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
SSU72-204ENST00000378726 ZFYP08048 801 aaPredicted RBP23.19■■□□□ 1.3
SSU72-204ENST00000378726 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
SSU72-204ENST00000378726 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
SSU72-204ENST00000378726 ARID4AP29374 1257 aaPredicted RBP23.18■■□□□ 1.3
SSU72-204ENST00000378726 CLEC17AQ6ZS10 378 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 BSDC1Q9NW68 430 aaPredicted RBP23.18■■□□□ 1.3
SSU72-204ENST00000378726 HMG20BQ9P0W2 317 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
SSU72-204ENST00000378726 LAMB2P55268 1798 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 BAG4O95429 457 aaKnown RBP23.18■■□□□ 1.3
SSU72-204ENST00000378726 CYP2E1P05181 493 aaPredicted RBP23.18■■□□□ 1.3
SSU72-204ENST00000378726 AK2P54819 239 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 CUL4AQ13619 759 aa23.18■■□□□ 1.3
SSU72-204ENST00000378726 PSMA5P28066 241 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 TSGA10IPQ3SY00 556 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 RUFY3Q7L099 469 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 OSBP2Q969R2 916 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 PDRG1Q9NUG6 133 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 NPHP1O15259 732 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 NFIXQ14938 502 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 TTF1Q15361 905 aaPredicted RBP23.17■■□□□ 1.3
SSU72-204ENST00000378726 WASHC4Q2M389 1173 aa23.17■■□□□ 1.3
SSU72-204ENST00000378726 CELF1Q92879 486 aaKnown RBP23.17■■□□□ 1.3
SSU72-204ENST00000378726 MAST3O60307 1309 aa23.16■■□□□ 1.3
SSU72-204ENST00000378726 VPS53Q5VIR6 699 aa23.16■■□□□ 1.3
SSU72-204ENST00000378726 PROM2Q8N271 834 aa23.16■■□□□ 1.3
SSU72-204ENST00000378726 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
SSU72-204ENST00000378726 ESPNB1AK53 854 aa23.16■■□□□ 1.3
SSU72-204ENST00000378726 NAP1L5Q96NT1 182 aaPredicted RBP23.16■■□□□ 1.3
SSU72-204ENST00000378726 M0R2C6 588 aa23.15■■□□□ 1.3
SSU72-204ENST00000378726 TXNRD1Q16881 649 aa23.15■■□□□ 1.3
SSU72-204ENST00000378726 LARP6Q9BRS8 491 aaKnown RBP23.15■■□□□ 1.3
SSU72-204ENST00000378726 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
SSU72-204ENST00000378726 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.15■■□□□ 1.3
SSU72-204ENST00000378726 LIMCH1Q9UPQ0 1083 aa23.15■■□□□ 1.3
SSU72-204ENST00000378726 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.3
SSU72-204ENST00000378726 BCAMP50895 628 aa23.14■■□□□ 1.3
SSU72-204ENST00000378726 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.3
SSU72-204ENST00000378726 MINPP1Q9UNW1 487 aa23.14■■□□□ 1.3
SSU72-204ENST00000378726 HSPD1P10809 573 aaKnown RBP23.14■■□□□ 1.29
SSU72-204ENST00000378726 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.29
SSU72-204ENST00000378726 SPATA5Q8NB90 893 aa23.14■■□□□ 1.29
SSU72-204ENST00000378726 INTS4Q96HW7 963 aaKnown RBP23.14■■□□□ 1.29
SSU72-204ENST00000378726 PIH1D3Q9NQM4 214 aaKnown RBP23.14■■□□□ 1.29
SSU72-204ENST00000378726 NUCB2P80303 420 aa23.13■■□□□ 1.29
SSU72-204ENST00000378726 APPBP2Q92624 585 aa23.13■■□□□ 1.29
SSU72-204ENST00000378726 COL4A1P02462 1669 aa23.13■■□□□ 1.29
SSU72-204ENST00000378726 CYP21A2P08686 494 aa23.13■■□□□ 1.29
SSU72-204ENST00000378726 BLOC1S2Q6QNY1 142 aa23.13■■□□□ 1.29
SSU72-204ENST00000378726 DDX49Q9Y6V7 483 aaKnown RBP23.13■■□□□ 1.29
SSU72-204ENST00000378726 CARMIL3Q8ND23 1372 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 RPAP1Q9BWH6 1393 aaPredicted RBP23.12■■□□□ 1.29
SSU72-204ENST00000378726 GYS1P13807 737 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 KRT32Q14532 448 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 KLHL40Q2TBA0 621 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 SLC9C2Q5TAH2 1124 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 PUS7LQ9H0K6 701 aaKnown RBP23.12■■□□□ 1.29
SSU72-204ENST00000378726 IDH1O75874 414 aaKnown RBP23.12■■□□□ 1.29
SSU72-204ENST00000378726 RXRBP28702 533 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 TM4SF1P30408 202 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 RASGRF1Q13972 1273 aa23.12■■□□□ 1.29
SSU72-204ENST00000378726 AKAP11Q9UKA4 1901 aa23.11■■□□□ 1.29
SSU72-204ENST00000378726 HMGB2P26583 209 aaKnown RBP23.11■■□□□ 1.29
SSU72-204ENST00000378726 COL9A3Q14050 684 aaPredicted RBP23.11■■□□□ 1.29
SSU72-204ENST00000378726 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
SSU72-204ENST00000378726 TRIM44Q96DX7 344 aaPredicted RBP23.11■■□□□ 1.29
SSU72-204ENST00000378726 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
SSU72-204ENST00000378726 ADD2P35612 726 aa23.1■■□□□ 1.29
SSU72-204ENST00000378726 COL24A1Q17RW2 1714 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms