RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 PPFIA3O75145 1194 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 OSBP2Q969R2 916 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
BEST1-201ENST00000378043 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
BEST1-201ENST00000378043 DNTTIP2Q5QJE6 756 aaKnown RBP12.88□□□□□ -0.35
BEST1-201ENST00000378043 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
BEST1-201ENST00000378043 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
BEST1-201ENST00000378043 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
BEST1-201ENST00000378043 FOSBP53539 338 aa12.87□□□□□ -0.35
BEST1-201ENST00000378043 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
BEST1-201ENST00000378043 MYRIPQ8NFW9 859 aa12.87□□□□□ -0.35
BEST1-201ENST00000378043 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
BEST1-201ENST00000378043 ADORA1P30542 326 aa12.87□□□□□ -0.35
BEST1-201ENST00000378043 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
BEST1-201ENST00000378043 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
BEST1-201ENST00000378043 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
BEST1-201ENST00000378043 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
BEST1-201ENST00000378043 PTGS1P23219 599 aa12.86□□□□□ -0.35
BEST1-201ENST00000378043 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
BEST1-201ENST00000378043 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
BEST1-201ENST00000378043 SCARF1Q14162 830 aa12.86□□□□□ -0.35
BEST1-201ENST00000378043 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
BEST1-201ENST00000378043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
BEST1-201ENST00000378043 USP28Q96RU2 1077 aa12.86□□□□□ -0.35
BEST1-201ENST00000378043 FDPSP14324 419 aaKnown RBP12.85□□□□□ -0.35
BEST1-201ENST00000378043 ZNF165P49910 485 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 PLA2G4DQ86XP0 818 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 ZNF274Q96GC6 653 aaPredicted RBP12.85□□□□□ -0.35
BEST1-201ENST00000378043 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 IL2RBP14784 551 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 EVCP57679 992 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
BEST1-201ENST00000378043 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 XAGE2Q96GT9 111 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
BEST1-201ENST00000378043 TPM3P06753 285 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 CCDC85AQ96PX6 553 aaPredicted RBP12.84□□□□□ -0.35
BEST1-201ENST00000378043 NRBP1Q9UHY1 535 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 MYH7P12883 1935 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 ZNF75DP51815 510 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 TSC1Q92574 1164 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 CARMIL3Q8ND23 1372 aa12.84□□□□□ -0.35
BEST1-201ENST00000378043 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
BEST1-201ENST00000378043 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 IQCB1Q15051 598 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 PI16Q6UXB8 463 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 CCDC186Q7Z3E2 898 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.35
BEST1-201ENST00000378043 ENGASEQ8NFI3 743 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.35
BEST1-201ENST00000378043 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.35
BEST1-201ENST00000378043 FGAP02671 866 aa12.83□□□□□ -0.36
BEST1-201ENST00000378043 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
BEST1-201ENST00000378043 HAND2P61296 217 aa12.83□□□□□ -0.36
BEST1-201ENST00000378043 LRMPQ12912 555 aa12.83□□□□□ -0.36
BEST1-201ENST00000378043 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
BEST1-201ENST00000378043 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
BEST1-201ENST00000378043 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.36
BEST1-201ENST00000378043 CSF1RP07333 972 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
BEST1-201ENST00000378043 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
BEST1-201ENST00000378043 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
BEST1-201ENST00000378043 ZNF330Q9Y3S2 320 aaPredicted RBP12.82□□□□□ -0.36
BEST1-201ENST00000378043 ZAP70P43403 619 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
BEST1-201ENST00000378043 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 A0A087WWV3 80 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
BEST1-201ENST00000378043 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
BEST1-201ENST00000378043 ANTXR2P58335 489 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 ATL3Q6DD88 541 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 OTUD7BQ6GQQ9 843 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 MB21D2Q8IYB1 491 aaPredicted RBP12.81□□□□□ -0.36
BEST1-201ENST00000378043 MAP7D2Q96T17 732 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms