RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 FKBP4Q02790 459 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLN5-201ENST00000377453 GTF2F1P35269 517 aaKnown RBP eCLIP23.93■■□□□ 1.42
CLN5-201ENST00000377453 NAA30Q147X3 362 aaPredicted RBP23.93■■□□□ 1.42
CLN5-201ENST00000377453 ADORA1P30542 326 aa23.92■■□□□ 1.42
CLN5-201ENST00000377453 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
CLN5-201ENST00000377453 IFIT1P09914 478 aaKnown RBP23.92■■□□□ 1.42
CLN5-201ENST00000377453 CBX1P83916 185 aa23.92■■□□□ 1.42
CLN5-201ENST00000377453 EXOSC10Q01780 885 aaKnown RBP23.92■■□□□ 1.42
CLN5-201ENST00000377453 A0A1B0GUL7 405 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 H7C1W4 665 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 ZMYM1Q5SVZ6 1142 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 PI16Q6UXB8 463 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 OSBP2Q969R2 916 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 PDIA3P30101 505 aaKnown RBP23.91■■□□□ 1.42
CLN5-201ENST00000377453 IQCB1Q15051 598 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 ZSCAN16Q9H4T2 348 aaPredicted RBP23.91■■□□□ 1.42
CLN5-201ENST00000377453 CFAP45Q9UL16 551 aa23.91■■□□□ 1.42
CLN5-201ENST00000377453 ME1P48163 572 aa23.9■■□□□ 1.42
CLN5-201ENST00000377453 SNW1Q13573 536 aaKnown RBP23.9■■□□□ 1.42
CLN5-201ENST00000377453 ATP2B3Q16720 1220 aa23.9■■□□□ 1.42
CLN5-201ENST00000377453 PPP4R3BQ5MIZ7 849 aa23.9■■□□□ 1.42
CLN5-201ENST00000377453 SPDYE4A6NLX3 237 aa23.9■■□□□ 1.42
CLN5-201ENST00000377453 USP27XA6NNY8 438 aa23.89■■□□□ 1.42
CLN5-201ENST00000377453 TPM3P06753 285 aa23.89■■□□□ 1.42
CLN5-201ENST00000377453 FSIP1Q8NA03 581 aa23.89■■□□□ 1.42
CLN5-201ENST00000377453 CCDC94Q9BW85 323 aaPredicted RBP23.89■■□□□ 1.42
CLN5-201ENST00000377453 CWC25Q9NXE8 425 aaPredicted RBP23.89■■□□□ 1.42
CLN5-201ENST00000377453 PDIA4P13667 645 aaKnown RBP23.89■■□□□ 1.41
CLN5-201ENST00000377453 FDPSP14324 419 aaKnown RBP23.89■■□□□ 1.41
CLN5-201ENST00000377453 SCARF1Q14162 830 aa23.89■■□□□ 1.41
CLN5-201ENST00000377453 ARFGEF2Q9Y6D5 1785 aa23.89■■□□□ 1.41
CLN5-201ENST00000377453 POLR3DP05423 398 aaPredicted RBP23.88■■□□□ 1.41
CLN5-201ENST00000377453 CHAF1AQ13111 956 aaPredicted RBP23.88■■□□□ 1.41
CLN5-201ENST00000377453 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
CLN5-201ENST00000377453 RCOR1Q9UKL0 485 aa23.88■■□□□ 1.41
CLN5-201ENST00000377453 DENND2AQ9ULE3 1009 aa23.88■■□□□ 1.41
CLN5-201ENST00000377453 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
CLN5-201ENST00000377453 PALLDQ8WX93 1383 aa23.88■■□□□ 1.41
CLN5-201ENST00000377453 A0A1B0GVL5 298 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 GOLGA6L19H0YKK7 550 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 FILIP1Q7Z7B0 1213 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 ZNF592Q92610 1267 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 HELLSQ9NRZ9 838 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 FOXP2O15409 715 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 RNF113AO15541 343 aaKnown RBP23.87■■□□□ 1.41
CLN5-201ENST00000377453 WASHC4Q2M389 1173 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 MTERF4Q7Z6M4 381 aaKnown RBP23.87■■□□□ 1.41
CLN5-201ENST00000377453 DSCC1Q9BVC3 393 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 LAMA4Q16363 1823 aa23.87■■□□□ 1.41
CLN5-201ENST00000377453 EYA2O00167 538 aa23.86■■□□□ 1.41
CLN5-201ENST00000377453 TNNT1P13805 278 aa23.86■■□□□ 1.41
CLN5-201ENST00000377453 NAA16Q6N069 864 aaPredicted RBP23.86■■□□□ 1.41
CLN5-201ENST00000377453 CCDC73Q6ZRK6 1079 aa23.86■■□□□ 1.41
CLN5-201ENST00000377453 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
CLN5-201ENST00000377453 NKX2-3Q8TAU0 364 aa23.86■■□□□ 1.41
CLN5-201ENST00000377453 LLPHQ9BRT6 129 aaKnown RBP23.85■■□□□ 1.41
CLN5-201ENST00000377453 CLIC4Q9Y696 253 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 SALL1Q9NSC2 1324 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 DHX40Q8IX18 779 aaKnown RBP23.85■■□□□ 1.41
CLN5-201ENST00000377453 AOPEPQ8N6M6 819 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 PCDHA7Q9UN72 937 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 RFX7Q2KHR2 1363 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 CARMIL3Q8ND23 1372 aa23.85■■□□□ 1.41
CLN5-201ENST00000377453 ATF3P18847 181 aa23.84■■□□□ 1.41
CLN5-201ENST00000377453 IL15P40933 162 aaPredicted RBP23.84■■□□□ 1.41
CLN5-201ENST00000377453 TPD52L1Q16890 204 aaPredicted RBP23.84■■□□□ 1.41
CLN5-201ENST00000377453 ENGASEQ8NFI3 743 aa23.84■■□□□ 1.41
CLN5-201ENST00000377453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.41
CLN5-201ENST00000377453 KINO60870 393 aaKnown RBP23.84■■□□□ 1.41
CLN5-201ENST00000377453 U2AF2P26368 475 aaKnown RBP eCLIP23.84■■□□□ 1.41
CLN5-201ENST00000377453 HMGB1P09429 215 aaKnown RBP23.83■■□□□ 1.41
CLN5-201ENST00000377453 STX1AQ16623 288 aa23.83■■□□□ 1.41
CLN5-201ENST00000377453 TRMT1Q9NXH9 659 aaKnown RBP23.83■■□□□ 1.41
CLN5-201ENST00000377453 BECN2A8MW95 431 aa23.83■■□□□ 1.41
CLN5-201ENST00000377453 BIN1O00499 593 aa23.83■■□□□ 1.41
CLN5-201ENST00000377453 GORABQ5T7V8 394 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 PDCL2Q8N4E4 241 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 AGXT2Q9BYV1 514 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 NDUFA8P51970 172 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 ISM2Q6H9L7 571 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 PUS7LQ9H0K6 701 aaKnown RBP23.82■■□□□ 1.4
CLN5-201ENST00000377453 GLI3P10071 1580 aa23.82■■□□□ 1.4
CLN5-201ENST00000377453 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
CLN5-201ENST00000377453 RXRAP19793 462 aa23.81■■□□□ 1.4
CLN5-201ENST00000377453 ZAP70P43403 619 aa23.81■■□□□ 1.4
CLN5-201ENST00000377453 FAM160A1Q05DH4 1040 aa23.81■■□□□ 1.4
CLN5-201ENST00000377453 AIFM3Q96NN9 605 aa23.81■■□□□ 1.4
CLN5-201ENST00000377453 LRRC8AQ8IWT6 810 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 KLHL34Q8N239 644 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 SYTL4Q96C24 671 aaPredicted RBP23.8■■□□□ 1.4
CLN5-201ENST00000377453 XAGE2Q96GT9 111 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 KLF18A0A0U1RQI7 1052 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 TTC39AQ5SRH9 613 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.8■■□□□ 1.4
CLN5-201ENST00000377453 ZNF396Q96N95 335 aaPredicted RBP23.8■■□□□ 1.4
CLN5-201ENST00000377453 GOLGA8BA8MQT2 603 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 KIF28PB7ZC32 967 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 FGAP02671 866 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 NCBP1Q09161 790 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms