RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SCAF8Q9UPN6 1271 aaKnown RBP17.72■□□□□ 0.43
CXCL12-202ENST00000374426 TNRC18O15417 2968 aaPredicted RBP17.72■□□□□ 0.43
CXCL12-202ENST00000374426 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
CXCL12-202ENST00000374426 FKBP1BP68106 108 aa17.71■□□□□ 0.43
CXCL12-202ENST00000374426 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
CXCL12-202ENST00000374426 DACT2Q5SW24 774 aa17.71■□□□□ 0.43
CXCL12-202ENST00000374426 RASAL3Q86YV0 1011 aa17.71■□□□□ 0.43
CXCL12-202ENST00000374426 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
CXCL12-202ENST00000374426 MYH3P11055 1940 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 H7C1W4 665 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 TXNRD3Q86VQ6 643 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 PAPPA2Q9BXP8 1791 aa17.7■□□□□ 0.42
CXCL12-202ENST00000374426 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
CXCL12-202ENST00000374426 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
CXCL12-202ENST00000374426 MOB2Q70IA6 237 aa17.69■□□□□ 0.42
CXCL12-202ENST00000374426 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
CXCL12-202ENST00000374426 ZNF646O15015 1829 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-202ENST00000374426 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 PDE4DIPQ5VU43 2346 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 COA1Q9GZY4 146 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 LEMD3Q9Y2U8 911 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
CXCL12-202ENST00000374426 WNT10BO00744 389 aa17.67■□□□□ 0.42
CXCL12-202ENST00000374426 KLRK1P26718 216 aa17.67■□□□□ 0.42
CXCL12-202ENST00000374426 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
CXCL12-202ENST00000374426 GCKRQ14397 625 aa17.67■□□□□ 0.42
CXCL12-202ENST00000374426 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-202ENST00000374426 OGFOD1Q8N543 542 aa17.67■□□□□ 0.42
CXCL12-202ENST00000374426 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
CXCL12-202ENST00000374426 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 ITGA6P23229 1130 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 CASP7P55210 303 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 FLIIQ13045 1269 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 ZNF804BA4D1E1 1349 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 IL16Q14005 1332 aa17.66■□□□□ 0.42
CXCL12-202ENST00000374426 CSF1RP07333 972 aa17.65■□□□□ 0.42
CXCL12-202ENST00000374426 SASH1O94885 1247 aa17.64■□□□□ 0.41
CXCL12-202ENST00000374426 TTLL5Q6EMB2 1281 aa17.64■□□□□ 0.41
CXCL12-202ENST00000374426 DNAAF4Q8WXU2 420 aa17.64■□□□□ 0.41
CXCL12-202ENST00000374426 ANKRD2Q9GZV1 360 aa17.64■□□□□ 0.41
CXCL12-202ENST00000374426 SLC34A2O95436 690 aa17.63■□□□□ 0.41
CXCL12-202ENST00000374426 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
CXCL12-202ENST00000374426 CTU1Q7Z7A3 348 aaKnown RBP17.63■□□□□ 0.41
CXCL12-202ENST00000374426 LINS1Q8NG48 757 aa17.63■□□□□ 0.41
CXCL12-202ENST00000374426 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
CXCL12-202ENST00000374426 MYH16Q9H6N6 1097 aa17.63■□□□□ 0.41
CXCL12-202ENST00000374426 MMP14P50281 582 aa17.62■□□□□ 0.41
CXCL12-202ENST00000374426 CHRNDQ07001 517 aa17.62■□□□□ 0.41
CXCL12-202ENST00000374426 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-202ENST00000374426 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
CXCL12-202ENST00000374426 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-202ENST00000374426 FANCIQ9NVI1 1328 aa17.62■□□□□ 0.41
CXCL12-202ENST00000374426 SNAP23O00161 211 aa17.61■□□□□ 0.41
CXCL12-202ENST00000374426 NF2P35240 595 aa17.61■□□□□ 0.41
CXCL12-202ENST00000374426 GTF2IP78347 998 aa17.61■□□□□ 0.41
CXCL12-202ENST00000374426 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
CXCL12-202ENST00000374426 IRS2Q9Y4H2 1338 aa17.61■□□□□ 0.41
CXCL12-202ENST00000374426 VAMP4O75379 141 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 KCNJ4P48050 445 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 SOX10P56693 466 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 CD209Q9NNX6 404 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 HDAC9Q9UKV0 1011 aa17.6■□□□□ 0.41
CXCL12-202ENST00000374426 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
CXCL12-202ENST00000374426 TM4SF4P48230 202 aa17.59■□□□□ 0.41
CXCL12-202ENST00000374426 PTPN12Q05209 780 aaKnown RBP17.59■□□□□ 0.41
CXCL12-202ENST00000374426 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
CXCL12-202ENST00000374426 CERS5Q8N5B7 392 aa17.59■□□□□ 0.41
CXCL12-202ENST00000374426 ZNF296Q8WUU4 475 aaPredicted RBP17.59■□□□□ 0.41
CXCL12-202ENST00000374426 TAF5LO75529 589 aa17.58■□□□□ 0.4
CXCL12-202ENST00000374426 FOXO4P98177 505 aa17.58■□□□□ 0.4
CXCL12-202ENST00000374426 MKRN3Q13064 507 aaKnown RBP17.58■□□□□ 0.4
CXCL12-202ENST00000374426 PRKG1Q13976 671 aa17.58■□□□□ 0.4
CXCL12-202ENST00000374426 C15orf52Q6ZUT6 534 aaKnown RBP17.58■□□□□ 0.4
CXCL12-202ENST00000374426 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.4
CXCL12-202ENST00000374426 CACNA1FO60840 1977 aa17.57■□□□□ 0.4
CXCL12-202ENST00000374426 F6X3S4 739 aa17.57■□□□□ 0.4
CXCL12-202ENST00000374426 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
CXCL12-202ENST00000374426 LDLRAD1Q5T700 205 aa17.57■□□□□ 0.4
CXCL12-202ENST00000374426 ARMC9Q7Z3E5 817 aa17.57■□□□□ 0.4
CXCL12-202ENST00000374426 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
CXCL12-202ENST00000374426 HTTP42858 3142 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
CXCL12-202ENST00000374426 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 DEFB129Q9H1M3 183 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 FZD1Q9UP38 647 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-202ENST00000374426 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
CXCL12-202ENST00000374426 GPR25O00155 361 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 SREBF2Q12772 1141 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 DLGAP5Q15398 846 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 PKN2Q16513 984 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms