RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 DSCC1Q9BVC3 393 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 CDHR2Q9BYE9 1310 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 DOT1LQ8TEK3 1739 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 IL6STP40189 918 aaPredicted RBP18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 CRKLP46109 303 aaKnown RBP18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 SUSD4Q5VX71 490 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 NCOA5Q9HCD5 579 aaKnown RBP18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 FOXP2O15409 715 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 ITPK1Q13572 414 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 SYAP1Q96A49 352 aaPredicted RBP18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 ALDH8A1Q9H2A2 487 aaPredicted RBP18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 NUP98P52948 1817 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 UBE2HP62256 183 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 SMIM5Q71RC9 77 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 DHX32Q7L7V1 743 aaKnown RBP18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
CNKSR1-202ENST00000374253 PDE8AO60658 829 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 TSPY26PQ9H489 355 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 SLIT2O94813 1529 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 ESPNB1AK53 854 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 PHKA1P46020 1223 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 TTC6Q86TZ1 520 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 RAB11FIP4Q86YS3 637 aa18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.93■□□□□ 0.62
CNKSR1-202ENST00000374253 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 SIK1P57059 783 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 ZNF34Q8IZ26 560 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 LAMA4Q16363 1823 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 IDH1O75874 414 aaKnown RBP18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 PPP1R9BQ96SB3 815 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
CNKSR1-202ENST00000374253 FGAP02671 866 aa18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 GIMAP6Q6P9H5 292 aa18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 VGLL2Q8N8G2 317 aa18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 PDE8BO95263 885 aa18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 PDCP20941 246 aa18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 PIH1D3Q9NQM4 214 aaKnown RBP18.91■□□□□ 0.62
CNKSR1-202ENST00000374253 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 GPAA1O43292 621 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 CCDC183Q5T5S1 534 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 DENND2AQ9ULE3 1009 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 EXOSC10Q01780 885 aaKnown RBP18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 CCDC102BQ68D86 513 aa18.9■□□□□ 0.62
CNKSR1-202ENST00000374253 AHDC1Q5TGY3 1603 aaPredicted RBP18.89■□□□□ 0.62
CNKSR1-202ENST00000374253 H3BQV1 296 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 KRT85P78386 507 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 FAM184AQ8NB25 1140 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 CTDNEP1O95476 244 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 GUCY1B3Q02153 619 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 APPBP2Q92624 585 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 TAOK2Q9UL54 1235 aa18.89■□□□□ 0.61
CNKSR1-202ENST00000374253 HMGB1P09429 215 aaKnown RBP18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 FAM98CQ17RN3 349 aaKnown RBP18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 MYH3P11055 1940 aa18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 ANKRD36CQ5JPF3 1778 aa18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 MPNDQ8N594 471 aa18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 WWC3Q9ULE0 1092 aa18.88■□□□□ 0.61
CNKSR1-202ENST00000374253 MYO5AQ9Y4I1 1855 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 COL22A1Q8NFW1 1626 aaPredicted RBP18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 PTPDC1A2A3K4 754 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 PFKFB2O60825 505 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 PHF14O94880 888 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 CAMK4Q16566 473 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 NKX2-3Q8TAU0 364 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 CAMTA2O94983 1202 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 APPP05067 770 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 LIG1P18858 919 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-202ENST00000374253 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 SPATA31A5Q5VU36 1347 aa18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 SPATA31A7Q8IWB4 1347 aa18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 ZFYP08048 801 aaPredicted RBP18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 AKAP11Q9UKA4 1901 aa18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
CNKSR1-202ENST00000374253 PDIA3P30101 505 aaKnown RBP18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 SPATA32Q96LK8 384 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 ZNF532Q9HCE3 1301 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 WNK3Q9BYP7 1800 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 ADD2P35612 726 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 CSPP1Q1MSJ5 1256 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 IQSEC3Q9UPP2 1182 aaPredicted RBP18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
CNKSR1-202ENST00000374253 PUM3Q15397 648 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms