RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 JAKMIP3Q5VZ66 844 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 HDXQ7Z353 690 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 WAPLQ7Z5K2 1190 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 ERCC4Q92889 916 aaPredicted RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 PNKPQ96T60 521 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 C14orf93Q9H972 538 aaKnown RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 A1CFQ9NQ94 594 aaKnown RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 PHACTR2O75167 634 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 TBC1D22AQ8WUA7 517 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 JPH2Q9BR39 696 aaPredicted RBP11.05□□□□□ -0.64
SF3A3-201ENST00000373019 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 SETBP1Q9Y6X0 1596 aa11.05□□□□□ -0.64
SF3A3-201ENST00000373019 ZFYVE9O95405 1425 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 FAM204AQ9H8W3 233 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 SH3BP1Q9Y3L3 701 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 SCRN1Q12765 414 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 STAG1Q8WVM7 1258 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 GOLGA1Q92805 767 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 A0A1W2PP64 1363 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 FYB1O15117 783 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 MAP4K4O95819 1239 aaPredicted RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
SF3A3-201ENST00000373019 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
SF3A3-201ENST00000373019 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
SF3A3-201ENST00000373019 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
SF3A3-201ENST00000373019 CCP110O43303 1012 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
SF3A3-201ENST00000373019 GPTP24298 496 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
SF3A3-201ENST00000373019 FAM71BQ8TC56 605 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 DHX58Q96C10 678 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 BIRC2Q13490 618 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 SKIDA1Q1XH10 827 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 TMEM139Q8IV31 216 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 ANKRD26Q9UPS8 1709 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 PNMA6EA0A0J9YXQ4 647 aa11.03□□□□□ -0.64
SF3A3-201ENST00000373019 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
SF3A3-201ENST00000373019 FAM83GA6ND36 823 aa11.02□□□□□ -0.64
SF3A3-201ENST00000373019 CTAGE5O15320 804 aa11.02□□□□□ -0.64
SF3A3-201ENST00000373019 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.64
SF3A3-201ENST00000373019 PRPF38AQ8NAV1 312 aaKnown RBP11.02□□□□□ -0.64
SF3A3-201ENST00000373019 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.64
SF3A3-201ENST00000373019 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.64
SF3A3-201ENST00000373019 TACO1Q9BSH4 297 aaKnown RBP11.02□□□□□ -0.64
SF3A3-201ENST00000373019 HMOX1P09601 288 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 DDR1Q08345 913 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
SF3A3-201ENST00000373019 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 MCM8Q9UJA3 840 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
SF3A3-201ENST00000373019 KLHL33A6NCF5 533 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
SF3A3-201ENST00000373019 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.65
SF3A3-201ENST00000373019 PAX7P23759 505 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 CASP8Q14790 479 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 CEP57L1Q8IYX8 460 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 MSANTD4Q8NCY6 345 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 ZSWIM4Q9H7M6 989 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 FAM169AQ9Y6X4 670 aa11.02□□□□□ -0.65
SF3A3-201ENST00000373019 KIF3CO14782 793 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 PDCP20941 246 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 ELF1P32519 619 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 PTH1RQ03431 593 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
SF3A3-201ENST00000373019 GBP6Q6ZN66 633 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 BORCS6Q96GS4 357 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 TMEM94Q12767 1356 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 EIF3JO75822 258 aaKnown RBP11.01□□□□□ -0.65
SF3A3-201ENST00000373019 SYF2O95926 243 aaKnown RBP11.01□□□□□ -0.65
SF3A3-201ENST00000373019 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
SF3A3-201ENST00000373019 GNG11P61952 73 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
SF3A3-201ENST00000373019 PI4K2BQ8TCG2 481 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 KCNB2Q92953 911 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 C19orf44Q9H6X5 657 aa11.01□□□□□ -0.65
SF3A3-201ENST00000373019 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms