RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 TCIRG1Q13488 830 aa20.52■□□□□ 0.87
C1orf56-201ENST00000368926 UTP14CQ5TAP6 766 aaKnown RBP20.52■□□□□ 0.87
C1orf56-201ENST00000368926 GPATCH3Q96I76 525 aa20.52■□□□□ 0.87
C1orf56-201ENST00000368926 CCDC171Q6TFL3 1326 aa20.51■□□□□ 0.87
C1orf56-201ENST00000368926 LARGE1O95461 756 aa20.51■□□□□ 0.87
C1orf56-201ENST00000368926 PLCB2Q00722 1185 aa20.51■□□□□ 0.87
C1orf56-201ENST00000368926 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
C1orf56-201ENST00000368926 C17orf53Q8N3J3 647 aaPredicted RBP20.51■□□□□ 0.87
C1orf56-201ENST00000368926 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
C1orf56-201ENST00000368926 ELP1O95163 1332 aa20.51■□□□□ 0.87
C1orf56-201ENST00000368926 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 MYD88Q99836 296 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 KRT85P78386 507 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 FAM200AQ8TCP9 573 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 SLC16A10Q8TF71 515 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 ARID3AQ99856 593 aa20.5■□□□□ 0.87
C1orf56-201ENST00000368926 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 CLASRPQ8N2M8 674 aaKnown RBP20.49■□□□□ 0.87
C1orf56-201ENST00000368926 LARP6Q9BRS8 491 aaKnown RBP20.49■□□□□ 0.87
C1orf56-201ENST00000368926 ISCA1Q9BUE6 129 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 UBN2Q6ZU65 1347 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 ATP5J2-PTCD1G3V325 749 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 IGKV5-2P06315 115 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 ZKSCAN1P17029 563 aaPredicted RBP20.49■□□□□ 0.87
C1orf56-201ENST00000368926 PDCP20941 246 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 HSP90AB3PQ58FF7 597 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 BEND3Q5T5X7 828 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 NLGN1Q8N2Q7 840 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 KCNF1Q9H3M0 494 aa20.49■□□□□ 0.87
C1orf56-201ENST00000368926 VPS37CA5D8V6 355 aaPredicted RBP20.48■□□□□ 0.87
C1orf56-201ENST00000368926 GPTP24298 496 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 TM4SF1P30408 202 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 OS9Q13438 667 aaPredicted RBP20.48■□□□□ 0.87
C1orf56-201ENST00000368926 MTX1Q13505 466 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 NFIXQ14938 502 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 MAP3K11Q16584 847 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 TPRNQ4KMQ1 711 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 PRPF40BQ6NWY9 871 aaKnown RBP20.48■□□□□ 0.87
C1orf56-201ENST00000368926 ECHDC1Q9NTX5 307 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
C1orf56-201ENST00000368926 COL24A1Q17RW2 1714 aa20.48■□□□□ 0.87
C1orf56-201ENST00000368926 HIP1O00291 1037 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 AP5Z1O43299 807 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 ZBTB7AO95365 584 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 ERC1Q8IUD2 1116 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 NUP62CLQ9H1M0 184 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
C1orf56-201ENST00000368926 CPA1P15085 419 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 DMTNQ08495 405 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 CWF19L2Q2TBE0 894 aaKnown RBP20.47■□□□□ 0.87
C1orf56-201ENST00000368926 EVI5LQ96CN4 794 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 PYCARDQ9ULZ3 195 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 HDAC5Q9UQL6 1122 aa20.47■□□□□ 0.87
C1orf56-201ENST00000368926 PSMA5P28066 241 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 PTH1RQ03431 593 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 NEXNQ0ZGT2 675 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 TRIM28Q13263 835 aaKnown RBP20.46■□□□□ 0.87
C1orf56-201ENST00000368926 NECTIN1Q15223 517 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 LINS1Q8NG48 757 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
C1orf56-201ENST00000368926 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 ME3Q16798 604 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 ADCK5Q3MIX3 580 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 NLRP10Q86W26 655 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 SETDB2Q96T68 719 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 MTFR1LQ9H019 292 aa20.46■□□□□ 0.87
C1orf56-201ENST00000368926 DDR1Q08345 913 aa20.45■□□□□ 0.86
C1orf56-201ENST00000368926 ANKRD1Q15327 319 aa20.45■□□□□ 0.86
C1orf56-201ENST00000368926 LARP1BQ659C4 914 aaKnown RBP20.45■□□□□ 0.86
C1orf56-201ENST00000368926 TSC1Q92574 1164 aa20.45■□□□□ 0.86
C1orf56-201ENST00000368926 ST3GAL1Q11201 340 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 MMP10P09238 476 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 TYRO3Q06418 890 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 TTC6Q86TZ1 520 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 SPC24Q8NBT2 197 aa20.44■□□□□ 0.86
C1orf56-201ENST00000368926 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
C1orf56-201ENST00000368926 SCAND2PQ9GZW5 306 aaPredicted RBP20.44■□□□□ 0.86
C1orf56-201ENST00000368926 CARMIL3Q8ND23 1372 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 RIOK3O14730 519 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 CTIFO43310 598 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 PDCL2Q8N4E4 241 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 ANKRD7Q92527 254 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 GTPBP4Q9BZE4 634 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 DDX19AQ9NUU7 478 aaKnown RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
C1orf56-201ENST00000368926 MRVI1Q9Y6F6 885 aa20.43■□□□□ 0.86
C1orf56-201ENST00000368926 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
C1orf56-201ENST00000368926 CREB3L3Q68CJ9 461 aa20.42■□□□□ 0.86
C1orf56-201ENST00000368926 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.42■□□□□ 0.86
C1orf56-201ENST00000368926 ALDH8A1Q9H2A2 487 aaPredicted RBP20.42■□□□□ 0.86
C1orf56-201ENST00000368926 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
C1orf56-201ENST00000368926 ZSCAN20P17040 1043 aaPredicted RBP20.42■□□□□ 0.86
C1orf56-201ENST00000368926 GCKRQ14397 625 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms