RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 DBNDD1Q9H9R9 158 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 CEP126Q9P2H0 1117 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 CXCL9Q07325 125 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 DOK7Q18PE1 504 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 ZNF526Q8TF50 670 aaPredicted RBP23.17■■□□□ 1.3
LMNA-204ENST00000368298 PUM3Q15397 648 aaKnown RBP23.16■■□□□ 1.3
LMNA-204ENST00000368298 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
LMNA-204ENST00000368298 WDR90Q96KV7 1748 aa23.15■■□□□ 1.3
LMNA-204ENST00000368298 DDNO94850 711 aaPredicted RBP23.15■■□□□ 1.3
LMNA-204ENST00000368298 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.35e-9■■■□□ 15.9
LMNA-204ENST00000368298 AAMPQ13685 434 aa23.15■■□□□ 1.3
LMNA-204ENST00000368298 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
LMNA-204ENST00000368298 SCN9AQ15858 1988 aa23.14■■□□□ 1.3
LMNA-204ENST00000368298 G3V3G9 751 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 HMMRO75330 724 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 TNIP1Q15025 636 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 DCAF8Q5TAQ9 597 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 CIAPIN1Q6FI81 312 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 LPIN2Q92539 896 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 PSME4Q14997 1843 aa23.14■■□□□ 1.29
LMNA-204ENST00000368298 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
LMNA-204ENST00000368298 ERICH6BQ5W0A0 696 aa23.13■■□□□ 1.29
LMNA-204ENST00000368298 GPBP1L1Q9HC44 474 aaPredicted RBP23.13■■□□□ 1.29
LMNA-204ENST00000368298 SASH1O94885 1247 aa23.12■■□□□ 1.29
LMNA-204ENST00000368298 IL1R1P14778 569 aa23.12■■□□□ 1.29
LMNA-204ENST00000368298 ZNF804AQ7Z570 1209 aa23.12■■□□□ 1.29
LMNA-204ENST00000368298 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
LMNA-204ENST00000368298 CD209Q9NNX6 404 aa23.12■■□□□ 1.29
LMNA-204ENST00000368298 RAD17O75943 681 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 IFIT1P09914 478 aaKnown RBP23.11■■□□□ 1.29
LMNA-204ENST00000368298 TFCP2Q12800 502 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 KCNQ5Q9NR82 932 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 AKAP2Q9Y2D5 859 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 POTECB2RU33 542 aa23.11■■□□□ 1.29
LMNA-204ENST00000368298 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
LMNA-204ENST00000368298 SCN4AP35499 1836 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 SLC5A1P13866 664 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 HIBADHP31937 336 aaKnown RBP23.1■■□□□ 1.29
LMNA-204ENST00000368298 C1QTNF8P60827 252 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 ATP2B3Q16720 1220 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 HSP90AB4PQ58FF6 505 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 GPR108Q9NPR9 543 aa23.1■■□□□ 1.29
LMNA-204ENST00000368298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.1■■□□□ 1.29
LMNA-204ENST00000368298 ZNF609O15014 1411 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 PSMD14O00487 310 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 VEGFAP15692 232 aaPredicted RBP23.09■■□□□ 1.29
LMNA-204ENST00000368298 GYG1P46976 350 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 CAVIN4Q5BKX8 364 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 TDRD7Q8NHU6 1098 aaKnown RBP23.09■■□□□ 1.29
LMNA-204ENST00000368298 NMRK2Q9NPI5 230 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 PCDHB15Q9Y5E8 787 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 GJA3Q9Y6H8 435 aa23.09■■□□□ 1.29
LMNA-204ENST00000368298 ZNF646O15015 1829 aaPredicted RBP23.09■■□□□ 1.29
LMNA-204ENST00000368298 ARAP2Q8WZ64 1704 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 USP17L3A6NCW0 530 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 USP17L4A6NCW7 530 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 ZBTB22O15209 634 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 STRIP1Q5VSL9 837 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 USP17L1Q7RTZ2 530 aa23.08■■□□□ 1.29
LMNA-204ENST00000368298 ERC1Q8IUD2 1116 aa23.07■■□□□ 1.28
LMNA-204ENST00000368298 DPF2Q92785 391 aa23.07■■□□□ 1.28
LMNA-204ENST00000368298 RRAGCQ9HB90 399 aa23.07■■□□□ 1.28
LMNA-204ENST00000368298 A0A1B0GUL7 405 aa23.06■■□□□ 1.28
LMNA-204ENST00000368298 IQCA1LA6NCM1 817 aa23.06■■□□□ 1.28
LMNA-204ENST00000368298 RPS12P25398 132 aaKnown RBP23.06■■□□□ 1.28
LMNA-204ENST00000368298 SCNN1DP51172 638 aa23.06■■□□□ 1.28
LMNA-204ENST00000368298 OS9Q13438 667 aaPredicted RBP23.06■■□□□ 1.28
LMNA-204ENST00000368298 EXOC6BQ9Y2D4 811 aa23.06■■□□□ 1.28
LMNA-204ENST00000368298 KIF3CO14782 793 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 TIMM10P62072 90 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 BCAMP50895 628 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 RSBN1LQ6PCB5 846 aaPredicted RBP23.05■■□□□ 1.28
LMNA-204ENST00000368298 VPS37DQ86XT2 251 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 AGBL3Q8NEM8 1001 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 EXOC6Q8TAG9 804 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 GMLQ99445 158 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 GPRC5DQ9NZD1 345 aa23.05■■□□□ 1.28
LMNA-204ENST00000368298 FAM205AQ6ZU69 1335 aa23.04■■□□□ 1.28
LMNA-204ENST00000368298 RAB11FIP3O75154 756 aa23.04■■□□□ 1.28
LMNA-204ENST00000368298 GMPSP49915 693 aaPredicted RBP23.04■■□□□ 1.28
LMNA-204ENST00000368298 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
LMNA-204ENST00000368298 FKBP1AP62942 108 aaKnown RBP23.03■■□□□ 1.28
LMNA-204ENST00000368298 GTF2IP78347 998 aa23.03■■□□□ 1.28
LMNA-204ENST00000368298 TNNI3KQ59H18 835 aa23.03■■□□□ 1.28
LMNA-204ENST00000368298 DCTPP1Q9H773 170 aa23.03■■□□□ 1.28
LMNA-204ENST00000368298 ZBTB12Q9Y330 459 aaPredicted RBP23.03■■□□□ 1.28
LMNA-204ENST00000368298 FPGT-TNNI3KV9GXZ4 949 aa23.03■■□□□ 1.28
LMNA-204ENST00000368298 MYO3BQ8WXR4 1341 aa23.02■■□□□ 1.28
LMNA-204ENST00000368298 RHPN1Q8TCX5 695 aa23.02■■□□□ 1.28
LMNA-204ENST00000368298 KIF1BPQ96EK5 621 aa23.02■■□□□ 1.28
LMNA-204ENST00000368298 XAGE2Q96GT9 111 aa23.02■■□□□ 1.28
LMNA-204ENST00000368298 TAF1DQ9H5J8 278 aaPredicted RBP23.02■■□□□ 1.28
LMNA-204ENST00000368298 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
LMNA-204ENST00000368298 ADORA1P30542 326 aa23.01■■□□□ 1.27
LMNA-204ENST00000368298 EPS15P42566 896 aa23■■□□□ 1.27
LMNA-204ENST00000368298 MMP14P50281 582 aa23■■□□□ 1.27
LMNA-204ENST00000368298 CCDC102BQ68D86 513 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms