RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 DIP2CQ9Y2E4 1556 aa7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 RNF17Q9BXT8 1623 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 POLR1AO95602 1720 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 REREQ9P2R6 1566 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 LRRC7Q96NW7 1537 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 NPATQ14207 1427 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 ABL1P00519 1130 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 TRIP4Q15650 581 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 TNFRSF25Q93038 417 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 EFCC1Q9HA90 598 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 EGFL7Q9UHF1 273 aa7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-204ENST00000368292 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 ICMTO60725 284 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 XYLBO75191 536 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 SASH3O75995 380 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 NOM1Q5C9Z4 860 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 TAF7LQ5H9L4 462 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 ABCA6Q8N139 1617 aa7.38□□□□□ -1.23
ECHDC1-204ENST00000368292 AGLP35573 1532 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 SCAPERQ9BY12 1400 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 ELOA3DA6NLF2 546 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 NFKB1P19838 968 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 NEUROD1Q13562 356 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 ELOA3BQ3SY89 546 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 KRT25Q7Z3Z0 450 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 ELOA3Q8NG57 546 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 PIK3R5Q8WYR1 880 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 ENAMQ9NRM1 1142 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 MROH2AA6NES4 1674 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 CTTNBP2Q8WZ74 1663 aa7.37□□□□□ -1.23
ECHDC1-204ENST00000368292 SOWAHDA6NJG2 315 aa7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 FAM13AO94988 1023 aa7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 ZNF428Q96B54 188 aa7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 NUDT16Q96DE0 195 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
ECHDC1-204ENST00000368292 KDM5CP41229 1560 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 FZD6O60353 706 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 PDGFAP04085 211 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 NEFLP07196 543 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 NEDD1Q8NHV4 660 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 EDEM1Q92611 657 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 STARD13Q9Y3M8 1113 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 GOLGA3Q08378 1498 aa7.35□□□□□ -1.23
ECHDC1-204ENST00000368292 DNMT1P26358 1616 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 XIRP1Q702N8 1843 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 H3BRB1 525 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 RARAP10276 462 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 MZF1P28698 734 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 ADH7P40394 386 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 CHSY3Q70JA7 882 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 GGNBP2Q9H3C7 697 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 TUT1Q9H6E5 874 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 DNAJB12Q9NXW2 375 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-204ENST00000368292 CNTNAP5Q8WYK1 1306 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 MMP20O60882 483 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 DHX32Q7L7V1 743 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 NLRP13Q86W25 1043 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 FAM9AQ8IZU1 332 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 UBE2OQ9C0C9 1292 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 IGFLR1Q9H665 355 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 POLIQ9UNA4 740 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 CNTLNQ9NXG0 1405 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 SYNMO15061 1565 aa7.33□□□□□ -1.24
ECHDC1-204ENST00000368292 NUP153P49790 1475 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 RAPGEF6Q8TEU7 1601 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 ALAS2P22557 587 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 AMPD1P23109 780 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 DGKGP49619 791 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 GLYCTKQ8IVS8 523 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 TLR7Q9NYK1 1049 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 SLC6A14Q9UN76 642 aa7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 FNDC3AQ9Y2H6 1198 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-204ENST00000368292 LRP6O75581 1613 aa7.31□□□□□ -1.24
ECHDC1-204ENST00000368292 A6NHS1 94 aa7.31□□□□□ -1.24
ECHDC1-204ENST00000368292 GSK3AP49840 483 aa7.31□□□□□ -1.24
ECHDC1-204ENST00000368292 MARSP56192 900 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-204ENST00000368292 TBC1D8BQ0IIM8 1120 aa7.31□□□□□ -1.24
ECHDC1-204ENST00000368292 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms