RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 F6X3S4 739 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 CUTAO60888 179 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 ELOA2Q8IYF1 753 aaPredicted RBP8.41□□□□□ -1.06
VTA1-202ENST00000367630 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 PRDM11Q9NQV5 511 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 OGFRQ9NZT2 677 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 RILPL1Q5EBL4 403 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 METTL24Q5JXM2 366 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 ERLIN2O94905 339 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 IARSP41252 1262 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 TNNI3KQ59H18 835 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 CATIPQ7Z7H3 387 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 DDX12PQ92771 950 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 RPGRIP1Q96KN7 1286 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 FPGT-TNNI3KV9GXZ4 949 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 ADAMTS13Q76LX8 1427 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 CYP2E1P05181 493 aaPredicted RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 LSG1Q9H089 658 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 IFI16Q16666 785 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 CCDC152Q4G0S7 254 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 CEP135Q66GS9 1140 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 GALNT17Q6IS24 598 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 VSIG10Q8N0Z9 540 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 ZCRB1Q8TBF4 217 aaKnown RBP8.4□□□□□ -1.06
VTA1-202ENST00000367630 GTF3C6Q969F1 213 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 NAPBQ9H115 298 aa8.4□□□□□ -1.06
VTA1-202ENST00000367630 CFAP65Q6ZU64 1925 aaKnown RBP8.4□□□□□ -1.07
VTA1-202ENST00000367630 EYA2O00167 538 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 RGL2O15211 777 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 CASQ1P31415 396 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 TDRD7Q8NHU6 1098 aaKnown RBP8.4□□□□□ -1.07
VTA1-202ENST00000367630 MAP4K1Q92918 833 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 HAUS7Q99871 368 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 TSGA10Q9BZW7 698 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 NYXQ9GZU5 481 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 GCP02774 474 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.07
VTA1-202ENST00000367630 SARM1Q6SZW1 724 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 FAM208AQ9UK61 1670 aaKnown RBP8.4□□□□□ -1.07
VTA1-202ENST00000367630 UTYO14607 1347 aa8.4□□□□□ -1.07
VTA1-202ENST00000367630 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 MYL1P05976 194 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 TNNT1P13805 278 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 APPBP2Q92624 585 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 PDLIM2Q96JY6 352 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 TSG101Q99816 390 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 SEMA3EO15041 775 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 PIP4K2BP78356 416 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 ZNF790Q6PG37 636 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 CTCFLQ8NI51 663 aaPredicted RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 MARCH6O60337 910 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 PRIM1P49642 420 aaKnown RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 KRT222Q8N1A0 295 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 MLKLQ8NB16 471 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 ANKRD2Q9GZV1 360 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 IVLP07476 585 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 SENP3Q9H4L4 574 aaPredicted RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 PSDA5PKW4 1024 aaPredicted RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 SLU7O95391 586 aaKnown RBP8.39□□□□□ -1.07
VTA1-202ENST00000367630 PLCG2P16885 1265 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 FKBP15Q5T1M5 1219 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 ESR2Q92731 530 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 KCNB2Q92953 911 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 USP44Q9H0E7 712 aa8.39□□□□□ -1.07
VTA1-202ENST00000367630 BICDL2A1A5D9 508 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 TNNT3P45378 269 aaPredicted RBP8.38□□□□□ -1.07
VTA1-202ENST00000367630 TDO2P48775 406 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 PDE4BQ07343 736 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 GCKRQ14397 625 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 BOLA2Q9H3K6 86 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 ERBB3P21860 1342 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 PALLDQ8WX93 1383 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 SPTLC2O15270 562 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 USO1O60763 962 aaKnown RBP8.38□□□□□ -1.07
VTA1-202ENST00000367630 ORC2Q13416 577 aaPredicted RBP8.38□□□□□ -1.07
VTA1-202ENST00000367630 FERMT2Q96AC1 680 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 IKBKBO14920 756 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 IL2RBP14784 551 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 TMEM266Q2M3C6 531 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 ORC3Q9UBD5 711 aaPredicted RBP8.38□□□□□ -1.07
VTA1-202ENST00000367630 CDK5RAP3Q96JB5 506 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 MAP3K15Q6ZN16 1313 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 SLC26A4O43511 780 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 517 ms