RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 AFAP1Q8N556 730 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 FAM13AO94988 1023 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 RFC4P35249 363 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC14Q49A88 953 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 CCT6BQ92526 530 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 SYT1P21579 422 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 CAPZA3Q96KX2 299 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 KRBA2Q6ZNG9 492 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 ZBTB21Q9ULJ3 1066 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 RASA3Q14644 834 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 INPP5BP32019 993 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
SPTBN1-202ENST00000356805 SYKP43405 635 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 PICALMQ13492 652 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 LMBR1Q8WVP7 490 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 NSD2O96028 1365 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 CACNA2D3Q8IZS8 1091 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 TRIM7Q9C029 511 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 KCNK9Q9NPC2 374 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 FAM169AQ9Y6X4 670 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 ATP11AP98196 1134 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 ZNF445P59923 1031 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 UAP1Q16222 522 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.335e-7■□□□□ 9.4
SPTBN1-202ENST00000356805 ALDH3A1P30838 453 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 NUCB1Q02818 461 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 IGF1RP08069 1367 aa12.98□□□□□ -0.33
SPTBN1-202ENST00000356805 TSNAXIP1Q2TAA8 658 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 CEP128Q6ZU80 1094 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 RNF168Q8IYW5 571 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 MIPOL1Q8TD10 442 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 TYRO3Q06418 890 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 TMX3Q96JJ7 454 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 VCXQ9H320 206 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 NCOA7Q8NI08 942 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 PPP1R7Q15435 360 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 FAM184BQ9ULE4 1060 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 ATP5DP30049 168 aa12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 CCDC117Q8IWD4 279 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-202ENST00000356805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.331e-29■□□□□ 9.8
SPTBN1-202ENST00000356805 WTAPQ15007 396 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 GIMAP6Q6P9H5 292 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 CFAP65Q6ZU64 1925 aaKnown RBP12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 ELP1O95163 1332 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 GSTO1P78417 241 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 PPANQ9NQ55 473 aaKnown RBP12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 CNGA4Q8IV77 575 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.33
SPTBN1-202ENST00000356805 ZEB2O60315 1214 aa12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 IFT81Q8WYA0 676 aa12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 ATP2A2P16615 1042 aaKnown RBP12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 CCDC184Q52MB2 194 aa12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.34
SPTBN1-202ENST00000356805 ATP5J2-PTCD1G3V325 749 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 ERCC5P28715 1186 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 USP48Q86UV5 1035 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 PPP1R9BQ96SB3 815 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 IMPACTQ9P2X3 320 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 CCDC38Q502W7 563 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 ERCC3P19447 782 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 FAM160A1Q05DH4 1040 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 FEZ2Q9UHY8 353 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
SPTBN1-202ENST00000356805 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms